RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TPBGQ13641 420 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 KCTD21Q4G0X4 260 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ESCO2Q56NI9 601 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 STUMQ69YW2 141 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ZNF773Q6PK81 442 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ACP7Q6ZNF0 438 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 NLRC3Q7RTR2 1065 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 OR52N4Q8NGI2 321 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 CCL13Q99616 98 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 NEK6Q9HC98 313 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ISYNA1Q9NPH2 558 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 NOX4Q9NPH5 578 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 MTCH1Q9NZJ7 389 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 FN1P02751 2386 aaKnown RBP14.58□□□□□ -0.08
SHMT2-225ENST00000556798 A8MV72 311 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-225ENST00000556798 KIAA1324LA8MWY0 1029 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-225ENST00000556798 TMPRSS2O15393 492 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 PIN1P1O15428 100 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 ALX3O95076 343 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 NXPH2O95156 264 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 IGFBP3P17936 291 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-225ENST00000556798 AMY2BP19961 511 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 PCMT1P22061 227 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 GNB2P62879 340 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 GPR50Q13585 617 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 KISS1Q15726 138 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 SMIM21Q3B7S5 101 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 ACSM3Q53FZ2 586 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 FAM27D1Q5T7N8 215 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 SATL1Q86VE3 508 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 GLCCI1Q86VQ1 547 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 FGFRL1Q8N441 504 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 MS4A15Q8N5U1 240 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 FAM216BQ8N7L0 139 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 TMEM186Q96B77 213 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 C12orf43Q96C57 262 aaKnown RBP14.57□□□□□ -0.08
SHMT2-225ENST00000556798 CEP19Q96LK0 163 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-225ENST00000556798 SMURF1Q9HCE7 757 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 HIF1ANQ9NWT6 349 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 CKLFQ9UBR5 152 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 KCNS2Q9ULS6 477 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 LRCH1Q9Y2L9 728 aa14.57□□□□□ -0.08
SHMT2-225ENST00000556798 OR2AT4A6NND4 320 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 INAFM1C9JVW0 142 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 MAGEB3O15480 346 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 NDUFA2O43678 99 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 NOS1APO75052 506 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-225ENST00000556798 FOXH1O75593 365 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 FCN3O75636 299 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 PSG2P11465 335 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 SELLP14151 372 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 FSTP19883 344 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 BCL3P20749 454 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 BDKRB2P30411 391 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 TGFBR2P37173 567 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 GABRA2P47869 451 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 NPBWR2P48146 333 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 CEBPDP49716 269 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-225ENST00000556798 DVL1P1P54792 670 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-225ENST00000556798 ZP1P60852 638 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 ERVK11-1P61568 191 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 PDZK1IP1Q13113 114 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 SSX1Q16384 188 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 ARMCX4Q5H9R4 360 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 DDI2Q5TDH0 399 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 PHC2Q8IXK0 858 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 ANGPTL6Q8NI99 470 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 HES4Q9HCC6 221 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 TMEM138Q9NPI0 162 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 RBFOX1Q9NWB1 397 aaKnown RBP14.56□□□□□ -0.08
SHMT2-225ENST00000556798 RASL12Q9NYN1 266 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 CLN8Q9UBY8 286 aa14.56□□□□□ -0.08
SHMT2-225ENST00000556798 IGKV1D-17A0A075B6S4 117 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 IGKV1-12A0A0C4DH73 117 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 NKX6-3A6NJ46 265 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 A8MXK9 166 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 GABRPO00591 440 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 CYB5AP00167 134 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 IGKV1D-12P01611 117 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 MAS1P04201 325 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 CALCBP10092 127 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 MAPK3P27361 379 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-225ENST00000556798 PSMB9P28065 219 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 IKZF1Q13422 519 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 UBE2UQ5VVX9 321 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 WDR25Q64LD2 544 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-225ENST00000556798 ZNF841Q6ZN19 808 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 CEACAM19Q7Z692 300 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 MKXQ8IYA7 352 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 EMG1Q92979 244 aaKnown RBP14.55□□□□□ -0.08
SHMT2-225ENST00000556798 GAFA1Q96PS6 74 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 GPER1Q99527 375 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 FAM192AQ9GZU8 254 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 IL36RNQ9UBH0 155 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 OR14J1Q9UGF5 321 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 ZNF222Q9UK12 451 aa14.55□□□□□ -0.08
SHMT2-225ENST00000556798 SF3B6Q9Y3B4 125 aaKnown RBP14.55□□□□□ -0.08
SHMT2-225ENST00000556798 TRAV20A0A0B4J274 112 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 RFPL4AA6NLU0 287 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms