RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ACP7Q6ZNF0 438 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 C9orf139Q6ZV77 190 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 UTS2BQ765I0 119 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 CALHM1Q8IU99 346 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 FGFRL1Q8N441 504 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF676Q8N7Q3 588 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 NPRL2Q8WTW4 380 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 C22orf15Q8WYQ4 148 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 ADAT3Q96EY9 351 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-205ENST00000556310 MED30Q96HR3 178 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 NRIP2Q9BQI9 281 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 ISG20L2Q9H9L3 353 aaKnown RBP9.54□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF69Q9UC07 566 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 HSPE1-MOB4S4R3N1 261 aa9.54□□□□□ -0.88
SLIRP-205ENST00000556310 FAM230AA0A1W2PPH8 454 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 TMEM212A6NML5 194 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 NXPH2O95156 264 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 TFF1P04155 84 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 ACAA1P09110 424 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-205ENST00000556310 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 LIMS3P0CW19 117 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 LIMS4P0CW20 117 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 MMP9P14780 707 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF20P17024 532 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 GBX2P52951 348 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-205ENST00000556310 CAV3P56539 151 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 DGUOKQ16854 277 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 METTL11BQ5VVY1 283 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 DNAAF1Q8NEP3 725 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 OR51A4Q8NGJ6 313 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 OR10AC1Q8NH08 325 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 C8orf46Q8TAG6 207 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 BORCS8Q96FH0 119 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 SDSLQ96GA7 329 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 ZNF488Q96MN9 340 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 WDFY2Q96P53 400 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 PCGF1Q9BSM1 259 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 DCTN5Q9BTE1 182 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 MS4A7Q9GZW8 240 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-205ENST00000556310 SIRPDQ9H106 197 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 HES4Q9HCC6 221 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 SLC25A10Q9UBX3 287 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-205ENST00000556310 KPTNQ9Y664 436 aa9.53□□□□□ -0.88
SLIRP-205ENST00000556310 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 IGHV3OR16-10A0A075B7F0 116 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 E9PI62 339 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 TOX4O94842 621 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 ZFPL1O95159 310 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 SFTPBP07988 381 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 GNAO1P09471 354 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 PRKACBP22694 351 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 GABRA2P47869 451 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 RBP2P50120 134 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 BPIFB3P59826 476 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 GPR157Q5UAW9 335 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 RBMS3Q6XE24 437 aaKnown RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 ANGPTL5Q86XS5 388 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 C8orf59Q8N0T1 100 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 KIR3DL3Q8N743 410 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 SPSB1Q96BD6 273 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 FGGYQ96C11 551 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 CEP19Q96LK0 163 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 TBX15Q96SF7 602 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 DIMT1Q9UNQ2 313 aaKnown RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 CAB39Q9Y376 341 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 EXOSC1Q9Y3B2 195 aaKnown RBP9.52□□□□□ -0.89
SLIRP-205ENST00000556310 MAB21L2Q9Y586 359 aa9.52□□□□□ -0.89
SLIRP-205ENST00000556310 TRBV23-1A0A0A0MS06 115 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 IGKV1-9A0A0C4DH69 117 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ERICH4A6NGS2 130 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 RFPL4AA6NLU0 287 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 RFPL4AL1F8VTS6 287 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 TRIM77I1YAP6 450 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 SLC1A7O00341 560 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 WIPF1O43516 503 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 KNG1P01042 644 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 MT-ND2P03891 347 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 PIPP12273 146 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ATF1P18846 271 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 MYL12AP19105 171 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 AZGP1P25311 298 aaKnown RBP9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ETV1P50549 477 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ATP1B3P54709 279 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ARF6P62330 175 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 SLC34A1Q06495 639 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 MED21Q13503 144 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 PDCD1Q15116 288 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 TMPRSS11AQ6ZMR5 421 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 BCL6BQ8N143 479 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF561Q8N587 486 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 SIGLECL1Q8N7X8 197 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms