RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ACSM3Q53FZ2 586 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 DCST2Q5T1A1 773 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 OGFRL1Q5TC84 451 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 HES3Q5TGS1 186 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 C9orf135Q5VTT2 229 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SDHAF4Q5VUM1 108 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FAHD2BQ6P2I3 314 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 CYHR1Q6ZMK1 362 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ZNF621Q6ZSS3 439 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SSX7Q7RTT5 188 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 H2BFWTQ7Z2G1 175 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 S100A7AQ86SG5 101 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 LYG2Q86SG7 212 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 PARGQ86W56 976 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 C8orf31Q8N9H6 132 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CDRT4Q8N9R6 151 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 LRRC75AQ8NAA5 344 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 B3GNT7Q8NFL0 401 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 OR2AP1Q8NGE2 309 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 OR51A7Q8NH64 312 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 PPTC7Q8NI37 304 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 COQ8AQ8NI60 647 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ITFG1Q8TB96 612 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ZPLD1Q8TCW7 415 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 BLOC1S5Q8TDH9 187 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 APH1BQ8WW43 257 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CREB3L1Q96BA8 519 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FAHD2AQ96GK7 314 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 NOL4LQ96MY1 436 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 IL4I1Q96RQ9 567 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 STACQ99469 402 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 HOPXQ9BPY8 73 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 TCEAL7Q9BRU2 100 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ING2Q9H160 280 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SPNS1Q9H2V7 528 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 VCXQ9H320 206 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 OR51M1Q9H341 326 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 KIR3DX1Q9H7L2 352 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TMEM138Q9NPI0 162 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 NANSQ9NR45 359 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TNFRSF19Q9NS68 423 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FGFR1OP2Q9NVK5 253 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SDHAF2Q9NX18 166 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TREM2Q9NZC2 230 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 VAPAQ9P0L0 249 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 DPM3Q9P2X0 92 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 KIF25Q9UIL4 384 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 BTNL2Q9UIR0 455 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ZNF225Q9UK10 706 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 RAB26Q9ULW5 256 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TP53TG3Q9ULZ0 132 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 RNF6Q9Y252 685 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 MYH7P12883 1935 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SEC16AO15027 2179 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 VWFP04275 2813 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RYR3Q15413 4870 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 BIRC6Q9NR09 4857 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PPIAL4CA0A0B4J2A2 164 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 A0A1B0GV90 55 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 A0A1W2PRD5 423 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PSMB11A5LHX3 300 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TSTD3H0UI37 97 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 hCG_2039718K7EN88 272 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PSMD12O00232 456 aaPredicted RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 SULT1C2O00338 296 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 CCRL2O00421 344 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 BTN3A3O00478 584 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 BHLHE40O14503 412 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PPIHO43447 177 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 GLSO94925 669 aaPredicted RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 DUSP14O95147 198 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 RCBTB2O95199 551 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 FARS2O95363 451 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 IFNA10P01566 189 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 JCHAINP01591 159 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 FBP1P09467 338 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ZNF286BP0CG31 522 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SMIM10L2AP0DMW4 78 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SMIM10L2BP0DMW5 78 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PPIAL4GP0DN37 164 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 BCKDHAP12694 445 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GTF2F2P13984 249 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 UQCRBP14927 111 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 H2AFXP16104 143 aaPredicted RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 RAB3AP20336 220 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OGNP20774 298 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 IDSP22304 550 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ELK4P28324 431 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GABRR2P28476 465 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SHMT2P34897 504 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SSTR5P35346 364 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ARR3P36575 388 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 MDH2P40926 338 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 RBM34P42696 430 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 RGRP47804 291 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GABRA4P48169 554 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PLA2G16P53816 162 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM33P57088 247 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms