RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FBN3Q75N90 2809 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 F8VVB4 439 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 F8VWA3 439 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 NXPH2O95156 264 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 LIMS3P0CW19 117 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 LIMS4P0CW20 117 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 NDUFB7P17568 137 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 FUT6P51993 359 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 DLX1P56177 255 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 ACTG1P63261 375 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 IL24Q13007 206 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 DEFB112Q30KQ8 113 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 VMO1Q7Z5L0 202 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 TMEM185AQ8NFB2 350 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 LHX4Q969G2 390 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 FGGYQ96C11 551 aa16.88■□□□□ 0.29
VTI1B-205ENST00000555543 MRPL48Q96GC5 212 aaKnown RBP16.88■□□□□ 0.29
VTI1B-205ENST00000555543 ADARB1P78563 741 aaKnown RBP16.87■□□□□ 0.29
VTI1B-205ENST00000555543 PRB3Q04118 309 aaPredicted RBP16.87■□□□□ 0.29
VTI1B-205ENST00000555543 BAMBIQ13145 260 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 PDCD1Q15116 288 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 KLHL22Q53GT1 634 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 OGFRL1Q5TC84 451 aaPredicted RBP16.87■□□□□ 0.29
VTI1B-205ENST00000555543 KIR3DL3Q8N743 410 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 Q8N7P7 452 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 ZNF676Q8N7Q3 588 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 BORCS8Q96FH0 119 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 FGF20Q9NP95 211 aaPredicted RBP16.87■□□□□ 0.29
VTI1B-205ENST00000555543 C8orf4Q9NR00 106 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 MTCH1Q9NZJ7 389 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 HHLA2Q9UM44 414 aa16.87■□□□□ 0.29
VTI1B-205ENST00000555543 IGHV1-69DA0A0B4J2H0 117 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 CASQ2O14958 399 aaPredicted RBP16.86■□□□□ 0.29
VTI1B-205ENST00000555543 SERPINA3P01011 423 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 IGHV1-69P01742 117 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 ZNF20P17024 532 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 PRTN3P24158 256 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 PRDX2P32119 198 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 CNN3Q15417 329 aaKnown RBP16.86■□□□□ 0.29
VTI1B-205ENST00000555543 TTC23Q5W5X9 447 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 UTS2BQ765I0 119 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 PDZD9Q8IXQ8 264 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 DHRSXQ8N5I4 330 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 OR13C3Q8NGS6 347 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 SLAMF9Q96A28 289 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 DMRTB1Q96MA1 342 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 JAM3Q9BX67 310 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 SIRT7Q9NRC8 400 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 OR14J1Q9UGF5 321 aa16.86■□□□□ 0.29
VTI1B-205ENST00000555543 INMTO95050 263 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 ZFPL1O95159 310 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 ATF1P18846 271 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 AZGP1P25311 298 aaKnown RBP16.85■□□□□ 0.29
VTI1B-205ENST00000555543 ETV1P50549 477 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 CAPZA1P52907 286 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 BPIFB3P59826 476 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 SLC9A3R2Q15599 337 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 SLC25A26Q70HW3 274 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 RNF144BQ7Z419 303 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 DNAAF1Q8NEP3 725 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 GATAD2BQ8WXI9 593 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 CEP19Q96LK0 163 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 MYCBPQ99417 103 aaPredicted RBP16.85■□□□□ 0.29
VTI1B-205ENST00000555543 PDCD1LG2Q9BQ51 273 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 PRDM13Q9H4Q3 707 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 C19orf12Q9NSK7 152 aa16.85■□□□□ 0.29
VTI1B-205ENST00000555543 A0A1W2PQ09 198 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 GNAO1P09471 354 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 RBP2P50120 134 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 GTF2A1P52655 376 aaPredicted RBP16.84■□□□□ 0.29
VTI1B-205ENST00000555543 RIPK1Q13546 671 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 XAF1Q6GPH4 301 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 EGFL6Q8IUX8 553 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 CMTM4Q8IZR5 234 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 ZNF561Q8N587 486 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 OR13C9Q8NGT0 318 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 IL36RNQ9UBH0 155 aa16.84■□□□□ 0.29
VTI1B-205ENST00000555543 TMEM89A2RUT3 159 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 TMEM212A6NML5 194 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 SLC1A7O00341 560 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 KNG1P01042 644 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 RNASE1P07998 156 aaKnown RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 POU3F4P49335 361 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 GBX2P52951 348 aaPredicted RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 ATP1B3P54709 279 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 KLRD1Q13241 179 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 OR2G6Q5TZ20 316 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 SETD9Q8NE22 299 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 RGP1Q92546 391 aaPredicted RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 GCDHQ92947 438 aaPredicted RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 TNFRSF14Q92956 283 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 OPALINQ96PE5 141 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 SPACA5Q96QH8 159 aa16.83■□□□□ 0.28
VTI1B-205ENST00000555543 ZMAT3Q9HA38 289 aaKnown RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 NKX1-2Q9UD57 310 aaPredicted RBP16.83■□□□□ 0.28
VTI1B-205ENST00000555543 TRBV23-1A0A0A0MS06 115 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 RNASEK-C17orf49H0YIS7 233 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 CLDN34H7C241 214 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 HOXA3O43365 443 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms