RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 BAK1Q16611 211 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 HIST2H2BCQ6DN03 193 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 BPIFB2Q8N4F0 458 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 POC5Q8NA72 575 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 NUDCD2Q8WVJ2 157 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
NEK9-205ENST00000555405 ZNF442Q9H7R0 627 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 MOV10Q9HCE1 1003 aaKnown RBP8.67□□□□□ -1.02
NEK9-205ENST00000555405 PLEKHJ1Q9NW61 149 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CST4P01036 141 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 MAB21L1Q13394 359 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
NEK9-205ENST00000555405 CDNFQ49AH0 187 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 C1orf100Q5SVJ3 147 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CCDC190Q86UF4 302 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 TMEM200AQ86VY9 491 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 SLC25A28Q96A46 364 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 C10orf35Q96D05 121 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 UQCC2Q9BRT2 126 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 MTCH1Q9NZJ7 389 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CACNG2Q9Y698 323 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 SIRPB1O00241 398 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CTAG2O75638 210 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 GLRA1P23415 457 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 TNFSF4P23510 183 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 TFF3Q07654 80 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 WDR86Q86TI4 376 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CCDC54Q8NEL0 328 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 UBALD1Q8TB05 177 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CPNE2Q96FN4 548 aaPredicted RBP8.67□□□□□ -1.02
NEK9-205ENST00000555405 ARHGAP5-AS1Q96IT6 56 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 NEDD4LQ96PU5 975 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CXXC4Q9H2H0 198 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 NARFLQ9H6Q4 476 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CYSLTR2Q9NS75 346 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 MCUBQ9NWR8 336 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 KLK11Q9UBX7 282 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
NEK9-205ENST00000555405 CYB5R3P00387 301 aaPredicted RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 CDKN1AP38936 164 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 TAS2R20P59543 309 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 TMEM42Q69YG0 159 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 BIVMQ86UB2 503 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 FAM169BQ8N8A8 192 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 ST6GALNAC5Q9BVH7 336 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 CHST6Q9GZX3 395 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 ZNF701Q9NV72 531 aaPredicted RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEK9-205ENST00000555405 TRAV39A0A0B4J263 110 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 DHRS7CA6NNS2 312 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 DEFB108AA8MXU0 73 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 PPP5CP53041 499 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 FBXL19-AS1Q494R0 122 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 Q6ZTK2 550 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 OSR2Q8N2R0 312 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 ASCC1Q8N9N2 400 aaKnown RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 BORCS5Q969J3 196 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 RAB3CQ96E17 227 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 FAAP24Q9BTP7 215 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 CHMP1AQ9HD42 196 aaPredicted RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 PPP1R3CQ9UQK1 317 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 DSCAMO60469 2012 aa8.66□□□□□ -1.02
NEK9-205ENST00000555405 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
NEK9-205ENST00000555405 PQLC2LA1A4F0 135 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 MEIOCA2RUB1 952 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ISPDA4D126 451 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 BPNT1O95861 308 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 IGHV3-13P01766 116 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 CD40LGP29965 261 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 APOBEC3AP31941 199 aaPredicted RBP8.65□□□□□ -1.02
NEK9-205ENST00000555405 CAPZA1P52907 286 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ZNF45Q02386 682 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ZNF79Q15937 498 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 FAAP20Q6NZ36 180 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 SSC4DQ8WTU2 575 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ZNF230Q9UIE0 474 aaPredicted RBP8.65□□□□□ -1.02
NEK9-205ENST00000555405 A0A1W2PQ09 198 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 OR5B21A6NL26 309 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 LANCL1O43813 399 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 IGHV1-46P01743 117 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ZNF250P15622 560 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 HLA-DMAP28067 261 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 GNG2P59768 71 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 ZNF529Q6P280 563 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
NEK9-205ENST00000555405 PRR18Q8N4B5 295 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 FBXW5Q969U6 566 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 HDHD3Q9BSH5 251 aaPredicted RBP8.65□□□□□ -1.02
NEK9-205ENST00000555405 LPAR5Q9H1C0 372 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 SAP30LQ9HAJ7 183 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 A3GALT2U3KPV4 340 aa8.65□□□□□ -1.02
NEK9-205ENST00000555405 V9GYH0 126 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms