RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 FAM90A1Q86YD7 464 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 GAL3ST1Q99999 423 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 FAM192AQ9GZU8 254 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 TMEM165Q9HC07 324 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 RNF223E7ERA6 249 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 WNT9BO14905 357 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 ANGPTL7O43827 346 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 ZNF780AO75290 641 aaPredicted RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 KDM4BO94953 1096 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 HEXAP06865 529 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 CD37P11049 281 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 CPT2P23786 658 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 RBMXP38159 391 aaKnown RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 OR3A4PP47883 348 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 BMXP51813 675 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 GMFBP60983 142 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 ERVK11-1P61568 191 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 ASCL4Q6XD76 172 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 SPNS3Q6ZMD2 512 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 DCDC5Q6ZRR9 648 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 TPRA1Q86W33 373 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 DEFB108BQ8NET1 73 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 METTL9Q9H1A3 318 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 WDR13Q9H1Z4 485 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 CNTD2Q9H8S5 307 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 HES4Q9HCC6 221 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 PCDHB16Q9NRJ7 776 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 NLKQ9UBE8 527 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 GHRLQ9UBU3 117 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 AK6Q9Y3D8 172 aaKnown RBP11.97□□□□□ -0.49
CHD8-208ENST00000555301 V9GY05 133 aa11.97□□□□□ -0.49
CHD8-208ENST00000555301 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 IGKV1-12A0A0C4DH73 117 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 IGKV1D-12P01611 117 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 RAB3BP20337 219 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 BCL3P20749 454 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 NPBWR2P48146 333 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.49
CHD8-208ENST00000555301 GPR176Q14439 515 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 RSU1Q15404 277 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 C1orf100Q5SVJ3 147 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 AWAT2Q6E213 333 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 ACP7Q6ZNF0 438 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 ANKRD13BQ86YJ7 626 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 C19orf18Q8NEA5 215 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 OR6M1Q8NGM8 313 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 EMG1Q92979 244 aaKnown RBP11.96□□□□□ -0.49
CHD8-208ENST00000555301 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 TMEM246Q9BRR3 403 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 CENPOQ9BU64 300 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 DNTTIP1Q9H147 329 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 ELL3Q9HB65 397 aaPredicted RBP11.96□□□□□ -0.49
CHD8-208ENST00000555301 IL36GQ9NZH8 169 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 PCDHB10Q9UN67 800 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 ING4Q9UNL4 249 aa11.96□□□□□ -0.49
CHD8-208ENST00000555301 MRPS28Q9Y2Q9 187 aaKnown RBP11.96□□□□□ -0.49
CHD8-208ENST00000555301 SETXQ7Z333 2677 aaKnown RBP11.96□□□□□ -0.5
CHD8-208ENST00000555301 IGHV3OR15-7A0A075B7D8 119 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 A0A096LNT2 108 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 SHISA3A0PJX4 238 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 OR2AT4A6NND4 320 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 CEACAM18A8MTB9 384 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 KNG1P01042 644 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 CSTBP04080 98 aaKnown RBP11.95□□□□□ -0.5
CHD8-208ENST00000555301 SFTPBP07988 381 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 UBBP0CG47 229 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 HTR2CP28335 458 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 GPR107Q5VW38 600 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 STUMQ69YW2 141 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 ELP2Q6IA86 826 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 GLIPR1L1Q6UWM5 242 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 FAM58AQ8N1B3 248 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 BATF2Q8N1L9 274 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 CLDND2Q8NHS1 167 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 SEH1LQ96EE3 360 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 NKX3-1Q99801 234 aaPredicted RBP11.95□□□□□ -0.5
CHD8-208ENST00000555301 NARFLQ9H6Q4 476 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
CHD8-208ENST00000555301 PLGRKTQ9HBL7 147 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 RBFOX1Q9NWB1 397 aaKnown RBP11.95□□□□□ -0.5
CHD8-208ENST00000555301 MIOXQ9UGB7 285 aa11.95□□□□□ -0.5
CHD8-208ENST00000555301 F8VVB4 439 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 F8VWA3 439 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 H7C1Q1 480 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 SLC17A2O00624 439 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 SLC22A1O15245 554 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 GABARAPO95166 117 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 CDRT1O95170 752 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 GYPAP02724 150 aa11.94□□□□□ -0.5
CHD8-208ENST00000555301 PSG2P11465 335 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms