RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CHST5Q9GZS9 411 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MS4A7Q9GZW8 240 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ELL3Q9HB65 397 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C8orf4Q9NR00 106 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 INPP5EQ9NRR6 644 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RASL12Q9NYN1 266 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MTCH1Q9NZJ7 389 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF222Q9UK12 451 aa10.25□□□□□ -0.77
TRAPPC6B-205ENST00000555269 A0A0A6YYJ9 748 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TRAV40A0A0B4J280 105 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SIGLEC5O15389 551 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NXPH2O95156 264 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ECDO95905 644 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CALCBP10092 127 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NDUFB7P17568 137 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ATF1P18846 271 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MPZP25189 248 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GBX2P52951 348 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DLX1P56177 255 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 HILS1P60008 231 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ERVK11-1P61568 191 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 IL13RA1P78552 427 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLC34A1Q06495 639 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LRRC10Q5BKY1 277 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 USP43Q70EL4 1123 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR13C3Q8NGS6 347 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLAMF9Q96A28 289 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NRIP2Q9BQI9 281 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DCTN5Q9BTE1 182 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SUCNR1Q9BXA5 334 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DNTTIP1Q9H147 329 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ONECUT1Q9UBC0 465 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLC25A10Q9UBX3 287 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 HHLA2Q9UM44 414 aa10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SIRT4Q9Y6E7 314 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MDFIC2A0A1B0GVS7 189 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NKX6-3A6NJ46 265 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 H0YAE9 185 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 XPNPEP2O43895 674 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZNF20P17024 532 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DCKP27707 260 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MTCP1P56278 107 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 IL24Q13007 206 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 METTL11BQ5VVY1 283 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 UTS2BQ765I0 119 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 EGFL6Q8IUX8 553 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SETD9Q8NE22 299 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMEM185AQ8NFB2 350 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR5AK2Q8NH90 309 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GATAD2BQ8WXI9 593 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PP6455Q8WZ26 134 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TFAP2CQ92754 450 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LHX4Q969G2 390 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RFT1Q96AA3 541 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C10orf35Q96D05 121 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BORCS8Q96FH0 119 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SDSLQ96GA7 329 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SPACA5Q96QH8 159 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 JAM3Q9BX67 310 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PKIBQ9C010 78 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR14J1Q9UGF5 321 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 POLDIP2Q9Y2S7 368 aa10.23□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TRBV2A0A0J9YWF9 115 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SPRY1O43609 319 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 LALBAP00709 142 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 AZGP1P25311 298 aaKnown RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 NPBWR2P48146 333 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CAPZA1P52907 286 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ATP1B3P54709 279 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 IL18R1Q13478 541 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C8orf59Q8N0T1 100 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 Q8N7P7 452 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BPIFB6Q8NFQ5 453 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR13C9Q8NGT0 318 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RGP1Q92546 391 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C1orf147Q96MC9 270 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 MYCBPQ99417 103 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BABAM2Q9NXR7 383 aa10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DIMT1Q9UNQ2 313 aaKnown RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CAB39Q9Y376 341 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC6B-205ENST00000555269 A0A1W2PRD5 423 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 A0A1W2PRF3 423 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 A0A1W2PRM7 423 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMEM212A6NML5 194 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PRKACBP22694 351 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DUSP1P28562 367 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms