RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 MRPS24Q96EL2 167 aaKnown RBP6.78□□□□□ -1.32
LINC01397-201ENST00000554808 CEP19Q96LK0 163 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 MRI1Q9BV20 369 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 FUNDC2Q9BWH2 189 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 BPESC1Q9GZL8 116 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 SEBOXQ9HB31 216 aaPredicted RBP6.78□□□□□ -1.32
LINC01397-201ENST00000554808 SMURF1Q9HCE7 757 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 DNAJB11Q9UBS4 358 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 MIOXQ9UGB7 285 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 WIPI2Q9Y4P8 454 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 MALRD1Q5VYJ5 2156 aa6.78□□□□□ -1.32
LINC01397-201ENST00000554808 IGKV1-27A0A075B6S5 117 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 LOC100506127A0A0U1RQW1 187 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ISPDA4D126 451 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 NKX6-3A6NJ46 265 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 GPR37O15354 613 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 LY6HO94772 140 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 KDM4BO94953 1096 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 GABARAPO95166 117 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 BPNT1O95861 308 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 CYB5R3P00387 301 aaPredicted RBP6.77□□□□□ -1.33
LINC01397-201ENST00000554808 KNG1P01042 644 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 IGHV2-70P01814 119 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 CSTBP04080 98 aaKnown RBP6.77□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM225BP0DP42 221 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 CD37P11049 281 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 GADD45AP24522 165 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 HTR2CP28335 458 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 PTGFRP43088 359 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 SCAND1P57086 179 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ERVK11-1P61568 191 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 LOXL1Q08397 574 aaPredicted RBP6.77□□□□□ -1.33
LINC01397-201ENST00000554808 RSU1Q15404 277 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF404Q494X3 552 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 C1orf100Q5SVJ3 147 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 AWAT2Q6E213 333 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ELP2Q6IA86 826 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 C22orf42Q6IC83 251 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ASCL4Q6XD76 172 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ACP7Q6ZNF0 438 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 SLC25A26Q70HW3 274 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 SLC36A1Q7Z2H8 476 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 LRRC28Q86X40 367 aaPredicted RBP6.77□□□□□ -1.33
LINC01397-201ENST00000554808 C11orf53Q8IXP5 236 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 TBC1D15Q8TC07 691 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 RAB2BQ8WUD1 216 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 TNFAIP8L1Q8WVP5 186 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 Q96MF0 132 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 GAL3ST1Q99999 423 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 NRIP2Q9BQI9 281 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 CHCHD6Q9BRQ6 235 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 FAM192AQ9GZU8 254 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 FGF23Q9GZV9 251 aaPredicted RBP6.77□□□□□ -1.33
LINC01397-201ENST00000554808 CST11Q9H112 138 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 METTL9Q9H1A3 318 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 OR51E2Q9H255 320 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 PPP1R3EQ9H7J1 279 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 PLGRKTQ9HBL7 147 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 HES4Q9HCC6 221 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 NLKQ9UBE8 527 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 KAAG1Q9UBP8 84 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ITGB1BP2Q9UKP3 347 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 V9GY05 133 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 ABCA2Q9BZC7 2435 aa6.77□□□□□ -1.33
LINC01397-201ENST00000554808 A0A1W2PPK0 400 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 LYNX1G3V0Z9 82 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 SLC17A2O00624 439 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 AKR7A2O43488 359 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 SYNGR1O43759 233 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 RHBDL1O75783 438 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 IL1AP01583 271 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 LYNX1P0DP58 116 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 USF1P22415 310 aaPredicted RBP6.76□□□□□ -1.33
LINC01397-201ENST00000554808 PMELP40967 661 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 TMBIM6P55061 237 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 FGF12P61328 243 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 IL13RA2Q14627 380 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 INSL4Q14641 139 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF146Q15072 292 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 DGUOKQ16854 277 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 SPRNQ5BIV9 151 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 NHLRC3Q5JS37 347 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 FAM27D1Q5T7N8 215 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ATPAF1Q5TC12 328 aaPredicted RBP6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF826PQ6ZT77 177 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 LRRTM1Q86UE6 522 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ANGPTL5Q86XS5 388 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 FAM58AQ8N1B3 248 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF561Q8N587 486 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 Q8NFD4 153 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 OR51T1Q8NGJ9 327 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 PPP1R35Q8TAP8 253 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 EMG1Q92979 244 aaKnown RBP6.76□□□□□ -1.33
LINC01397-201ENST00000554808 RFT1Q96AA3 541 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 MED30Q96HR3 178 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
LINC01397-201ENST00000554808 SPACA5Q96QH8 159 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms