RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DOK3Q7L591 496 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 MDGA2Q7Z553 956 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 PEG10Q86TG7 708 aaKnown RBP9.7□□□□□ -0.86
SRP54-205ENST00000554803 BAP18Q8IXM2 172 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 GTPBP8Q8N3Z3 284 aaPredicted RBP9.7□□□□□ -0.86
SRP54-205ENST00000554803 PNLDC1Q8NA58 520 aaKnown RBP9.7□□□□□ -0.86
SRP54-205ENST00000554803 OR52H1Q8NGJ2 320 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 OR2AJ1Q8NGZ0 328 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 FAM57AQ8TBR7 257 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 DVL3Q92997 716 aaPredicted RBP9.7□□□□□ -0.86
SRP54-205ENST00000554803 SLAMF6Q96DU3 332 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 PIK3IP1Q96FE7 263 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 LRRC46Q96FV0 321 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 KLHDC3Q9BQ90 382 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 HES7Q9BYE0 225 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 CHST6Q9GZX3 395 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 PBOV1Q9GZY1 135 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 WIF1Q9Y5W5 379 aa9.7□□□□□ -0.86
SRP54-205ENST00000554803 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 TMEM235A6NFC5 223 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 SERPINE3A8MV23 424 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 INAFM1C9JVW0 142 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 MS4A18H0YCH9 400 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 H7C2Y5 167 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 SNAPINO95295 136 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 IGHG1P01857 330 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 TTRP02766 147 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 FREM3P0C091 2139 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 PAX6P26367 422 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 ZNF93P35789 620 aaPredicted RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 EIF1P41567 113 aaKnown RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 SSR4P51571 173 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 OC90Q02509 493 aaPredicted RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 SPOCK1Q08629 439 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 OR1C1Q15619 314 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 ODF4Q2M2E3 257 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 MS4A18Q3C1V0 323 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 CD163Q86VB7 1156 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 SKA3Q8IX90 412 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 COMMD1Q8N668 190 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 OR10G3Q8NGC4 313 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 OR4D6Q8NGJ1 314 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 RND1Q92730 232 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 SPACA9Q96E40 222 aaPredicted RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 SIGLEC12Q96PQ1 595 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 AQP10Q96PS8 301 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 TSNAXQ99598 290 aaKnown RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 SEC11CQ9BY50 192 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 CNTD2Q9H8S5 307 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 CGGBP1Q9UFW8 167 aaPredicted RBP9.69□□□□□ -0.86
SRP54-205ENST00000554803 ZNF175Q9Y473 711 aa9.69□□□□□ -0.86
SRP54-205ENST00000554803 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 LIPT2A6NK58 231 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 DHRS7CA6NNS2 312 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 ATP6V1G2-DDX39BF2Z307 99 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 DNASE2O00115 360 aaPredicted RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 SFT2D2O95562 160 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 SP1P08047 785 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 VSIG8P0DPA2 414 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 CD79AP11912 226 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 HIST1H1DP16402 221 aaKnown RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 PTGDSP41222 190 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 CYB561P49447 251 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 ZNF41P51814 821 aaPredicted RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 LSM6P62312 80 aaKnown RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 MICBQ29980 383 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 SHEQ5VZ18 495 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 CFAP77Q6ZQR2 320 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 Q6ZSR3 168 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 UEVLDQ8IX04 471 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 FAM89BQ8N5H3 189 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 CHST4Q8NCG5 386 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 NOXO1Q8NFA2 376 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 OR5AP2Q8NGF4 316 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 OR6X1Q8NH79 312 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 EMG1Q92979 244 aaKnown RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 FGGYQ96C11 551 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 RAB3CQ96E17 227 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 MRPL13Q9BYD1 178 aaKnown RBP9.68□□□□□ -0.86
SRP54-205ENST00000554803 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 HDGFL3Q9Y3E1 203 aa9.68□□□□□ -0.86
SRP54-205ENST00000554803 A0A087WZY1 265 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 MEIS3P1A6NDR6 274 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 RNF212BA8MTL3 300 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 P2RY10O00398 339 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 GMFGO60234 142 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 MTRF1O75570 445 aaKnown RBP9.67□□□□□ -0.86
SRP54-205ENST00000554803 GAPDHP04406 335 aaKnown RBP9.67□□□□□ -0.86
SRP54-205ENST00000554803 CCL3P10147 92 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 NAT2P11245 290 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 HRH1P35367 487 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 THBS4P35443 961 aa9.67□□□□□ -0.86
SRP54-205ENST00000554803 RPS27P42677 84 aaKnown RBP9.67□□□□□ -0.86
SRP54-205ENST00000554803 ZNF133P52736 654 aaPredicted RBP9.67□□□□□ -0.86
SRP54-205ENST00000554803 ATP1B3P54709 279 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms