RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PTTG3PQ9NZH4 202 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ONECUT1Q9UBC0 465 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 KAAG1Q9UBP8 84 aa3.91□□□□□ -1.78
ATXN3-228ENST00000554592 ZMAT5Q9UDW3 170 aaKnown RBP3.91□□□□□ -1.78
ATXN3-228ENST00000554592 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.78
ATXN3-228ENST00000554592 DOCK11Q5JSL3 2073 aa3.9□□□□□ -1.78
ATXN3-228ENST00000554592 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.78
ATXN3-228ENST00000554592 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 A0A1W2PP11 408 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 A0A1W2PRD5 423 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 A0A1W2PRF3 423 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 A0A1W2PRM7 423 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TRAPPC13A5PLN9 417 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 OOEPA6NGQ2 149 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 A6NIZ1 184 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 CPSF4LA6NMK7 179 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 VGLL3A8MV65 326 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SDHDO14521 159 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 BIRC5O15392 142 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TYROBPO43914 113 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 OR7A10O76100 309 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 PTBP3O95758 552 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 IGF2P01344 180 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 GYPAP02724 150 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 MT-ND1P03886 318 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 OPN1SWP03999 348 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 THY1P04216 161 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 HLA-DPB1P04440 258 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ACAA1P09110 424 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TSPAN19P0C672 248 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TROVE2P10155 538 aaKnown RBP eCLIP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 IDO1P14902 403 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 BGNP21810 368 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 PPIBP23284 216 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SAA4P35542 130 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SLC1A6P48664 564 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 POLR2JP52435 117 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 RAP1BP61224 184 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 RPL27P61353 136 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 RAP1AP62834 184 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SLC35A2P78381 396 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SCARB2Q14108 478 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 MPPED2Q15777 294 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 LY6EQ16553 131 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 DUSP7Q16829 419 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 C9orf152Q5JTZ5 239 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 CASC10Q5T4H9 136 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 NCR3LG1Q68D85 454 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TEX38Q6PEX7 206 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ASRGL1Q7L266 308 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 Q8N2B8 174 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 GCSAMQ8N6F7 178 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 Q8N7P7 452 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ZBTB8BQ8NAP8 495 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SMYD1Q8NB12 490 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 OR6T1Q8NGN1 323 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 MOSPD2Q8NHP6 518 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 GTF2H4Q92759 462 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TNFRSF14Q92956 283 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 APOBEC3DQ96AK3 386 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SGTBQ96EQ0 304 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SORT1Q99523 831 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 PAIP2Q9BPZ3 127 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ECSITQ9BQ95 431 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 CDCA4Q9BXL8 241 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 GPR61Q9BZJ8 451 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 C20orf27Q9GZN8 174 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 TMEM38AQ9H6F2 299 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 WDR55Q9H6Y2 383 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 MEPEQ9NQ76 525 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SIRT7Q9NRC8 400 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 UFSP2Q9NUQ7 469 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 SLC7A7Q9UM01 511 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 AURKCQ9UQB9 309 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 ANGPT4Q9Y264 503 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
ATXN3-228ENST00000554592 GMEB1Q9Y692 573 aa3.9□□□□□ -1.79
ATXN3-228ENST00000554592 LCE6AA0A183 80 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 HTR3EA5X5Y0 456 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 OR6C6A6NF89 314 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 TRPC5OSA6NMA1 111 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 M0QX08 132 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 NDUFB3O43676 98 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 ANGPTL7O43827 346 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 FCN3O75636 299 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 LHBP01229 141 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 PAICSP22234 425 aaKnown RBP3.89□□□□□ -1.79
ATXN3-228ENST00000554592 AQP1P29972 269 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 RPL4P36578 427 aaKnown RBP3.89□□□□□ -1.79
ATXN3-228ENST00000554592 RBM34P42696 430 aaKnown RBP3.89□□□□□ -1.79
ATXN3-228ENST00000554592 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
ATXN3-228ENST00000554592 MZT1Q08AG7 82 aa3.89□□□□□ -1.79
ATXN3-228ENST00000554592 STX3Q13277 289 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms