RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 Q8N9G6 341 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 CDRT4Q8N9R6 151 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR51G2Q8NGK0 314 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR9G4Q8NGQ1 327 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR9Q1Q8NGQ5 310 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR13A1Q8NGR1 328 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR52N1Q8NH53 320 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 PFN4Q8NHR9 129 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC37A2Q8TED4 501 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 TMEM203Q969S6 136 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC25A36Q96CQ1 311 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 C10orf35Q96D05 121 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 SGK494Q96LW2 274 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 NEDD4LQ96PU5 975 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF426Q9BUY5 554 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 HCAR1Q9BXC0 346 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 OR52D1Q9H346 318 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 LRRN3Q9H3W5 708 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 FAM60AQ9NP50 221 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 ABCB9Q9NP78 766 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 MEPEQ9NQ76 525 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 HRASLS2Q9NWW9 162 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 FLRT3Q9NZU0 649 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 SIGLEC7Q9Y286 467 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 TMED7Q9Y3B3 224 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 KPTNQ9Y664 436 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 LRRK2Q5S007 2527 aa4.43□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A0B4J2E0 115 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A1B0GW15 77 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A1B0GX12 115 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 D6RAR5 112 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 NPIPB9F8W1W9 429 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 GABRPO00591 440 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 RAB29O14966 203 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 PLA2G10O15496 165 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CHST10O43529 356 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 SYNGR3O43761 229 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 RDH16O75452 317 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CSF3P09919 207 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC35E2P0CK97 266 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 IL7P13232 177 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 IFI30P13284 250 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 IRF2P14316 349 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC2A5P22732 501 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 IFNA8P32881 189 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 GABRA3P34903 492 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 NKX2-1P43699 371 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 GABRA4P48169 554 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 EMDP50402 254 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CAV3P56539 151 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CTBP2P56545 445 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 VSX2P58304 361 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 PLP1P60201 277 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 MXD1Q05195 221 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ILF3Q12906 894 aaKnown RBP eCLIP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 SRSF6Q13247 344 aaKnown RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 GPR50Q13585 617 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 KRR1Q13601 381 aaKnown RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF141Q15928 474 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF791Q3KP31 576 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF613Q6PF04 617 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 XKRXQ6PP77 449 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF322Q6U7Q0 402 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 UTS2BQ765I0 119 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 H2BFWTQ7Z2G1 175 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 MRPL21Q7Z2W9 205 aaKnown RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 RANBP3LQ86VV4 465 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 COMMD2Q86X83 199 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 HEATR5AQ86XA9 2040 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 RP1L1Q8IWN7 2480 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CSNK1A1LQ8N752 337 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 TMEM99Q8N816 258 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 COX18Q8N8Q8 333 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 C9orf106Q8NAJ2 232 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 OR2T33Q8NG76 320 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 TMEM239Q8WW34 195 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 UFD1Q92890 307 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 RERGQ96A58 199 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CXorf58Q96LI9 332 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CEP19Q96LK0 163 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 KCTD7Q96MP8 289 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 NDUFAF3Q9BU61 184 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 HOXD1Q9GZZ0 328 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 TPK1Q9H3S4 243 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 FOLH1BQ9HBA9 442 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 LPAR2Q9HBW0 351 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 STARD5Q9NSY2 213 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 POMT2Q9UKY4 750 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 CSMD1Q96PZ7 3565 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 LRBAP50851 2863 aa4.42□□□□□ -1.7
MTHFD1-206ENST00000554353 NUP210LQ5VU65 1888 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A1B0GWA3 101 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A1W2PQL4 384 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A1W2PS18 150 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 FRG2CA6NGY1 282 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms