RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TBX5Q99593 518 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 ALG8Q9BVK2 526 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 TXNL4BQ9NX01 149 aaKnown RBP10.88□□□□□ -0.67
SHMT2-211ENST00000554310 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 OR52A1Q9UKL2 312 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 FBN3Q75N90 2809 aa10.88□□□□□ -0.67
SHMT2-211ENST00000554310 KIR2DS1A0A191URI9 304 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 DHRS7CA6NNS2 312 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 CDIPTO14735 213 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 TNFRSF13BO14836 293 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 MAGEB4O15481 346 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 ADAM20O43506 726 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 ENSAO43768 121 aaKnown RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 FAHP16930 419 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 CALRP27797 417 aaKnown RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 CD40LGP29965 261 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 S100A5P33763 92 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 RPS25P62851 125 aaKnown RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 GNG3P63215 75 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 PAX8Q06710 450 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 C11orf91Q3C1V1 193 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF684Q5T5D7 378 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 CD276Q5ZPR3 534 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 PLEKHG7Q6ZR37 379 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 FAM220AQ7Z4H9 259 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 YIPF7Q8N8F6 280 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 RNF170Q96K19 258 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 NUDT16L1Q9BRJ7 211 aaKnown RBP10.87□□□□□ -0.67
SHMT2-211ENST00000554310 SUCNR1Q9BXA5 334 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 KAAG1Q9UBP8 84 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 PIGLQ9Y2B2 252 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 GSTK1Q9Y2Q3 226 aa10.87□□□□□ -0.67
SHMT2-211ENST00000554310 C22orf46C9J442 243 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 LALBAP00709 142 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 GYPAP02724 150 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 CCL1P22362 96 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 FPR2P25090 351 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 RPS19P39019 145 aaKnown RBP10.86□□□□□ -0.67
SHMT2-211ENST00000554310 ETV6P41212 452 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 RORCP51449 518 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 GPM6AP51674 278 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 PPP5CP53041 499 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 TAS2R43P59537 309 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 HILS1P60008 231 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 SRSF2Q01130 221 aaKnown RBP10.86□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF45Q02386 682 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 CEACAM21Q3KPI0 293 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 PLCXD3Q63HM9 321 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 Q6ZNX1 250 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 DOK3Q7L591 496 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 SCCPDHQ8NBX0 429 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 UPRTQ96BW1 309 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 KCTD7Q96MP8 289 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 C19orf24Q9BVV8 132 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 FGF23Q9GZV9 251 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-211ENST00000554310 BABAM2Q9NXR7 383 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 NUP50Q9UKX7 468 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 V9GYS6 101 aa10.86□□□□□ -0.67
SHMT2-211ENST00000554310 IGHV3OR15-7A0A075B7D8 119 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 A0A1B0GTI1 187 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF732B4DXR9 585 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 TMPRSS2O15393 492 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 RPP14O95059 124 aaKnown RBP10.85□□□□□ -0.67
SHMT2-211ENST00000554310 VENTXO95231 258 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 FABP5Q01469 135 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 ZNF85Q03923 595 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 KLF17Q5JT82 389 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-211ENST00000554310 WDR38Q5JTN6 314 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 CEP78Q5JTW2 689 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 CLVS2Q5SYC1 327 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 TMEM42Q69YG0 159 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 STUMQ69YW2 141 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 Q6ZSR3 168 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 SLC36A1Q7Z2H8 476 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 OR5A2Q8NGI9 324 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 PPP1R14AQ96A00 147 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 SLC25A46Q96AG3 418 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 SLC6A7Q99884 636 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 C6orf62Q9GZU0 229 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-211ENST00000554310 DNTTIP1Q9H147 329 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 OR51I2Q9H344 312 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 SMURF1Q9HCE7 757 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 ACOXLQ9NUZ1 547 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 DNAJB11Q9UBS4 358 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 GNG8Q9UK08 70 aa10.85□□□□□ -0.67
SHMT2-211ENST00000554310 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 A0A1B0GVI7 797 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 NKX6-3A6NJ46 265 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 P2RY10O00398 339 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 DVL1O14640 695 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 CDRT1O95170 752 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 ECDO95905 644 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-211ENST00000554310 NRASP01111 189 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 LIPFP07098 398 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms