RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FAM76BQ5HYJ3 339 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TEX36Q5VZQ5 186 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 WDR25Q64LD2 544 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 RPL22L1Q6P5R6 122 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 FIP1L1Q6UN15 594 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 IL17RELQ6ZVW7 336 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 KRT74Q7RTS7 529 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 PRSS35Q8N3Z0 413 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 PNLDC1Q8NA58 520 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TRMT10AQ8TBZ6 339 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 NPRL2Q8WTW4 380 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 APH1BQ8WW43 257 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 RAB40AQ8WXH6 277 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ST8SIA4Q92187 359 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 MYDGFQ969H8 173 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 PELI1Q96FA3 418 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 DNTTIP1Q9H147 329 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TLNRD1Q9H1K6 362 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 OR51I2Q9H344 312 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 METTL17Q9H7H0 456 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 RASL12Q9NYN1 266 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 CNOT2Q9NZN8 540 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 DIMT1Q9UNQ2 313 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 DHDHQ9UQ10 334 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ERGIC3Q9Y282 383 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 MTORP42345 2549 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 CR1P17927 2039 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 NAV3Q8IVL0 2385 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 IGHV3OR15-7A0A075B7D8 119 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 A6NIN4 97 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 AKR7A2O43488 359 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 PSPNO60542 156 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 NXPH2O95156 264 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 LHBP01229 141 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 LIPFP07098 398 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-209ENST00000553855 KIR3DL2P43630 455 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 GABRA2P47869 451 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 TGM4P49221 684 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 RBP2P50120 134 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 CAPZA1P52907 286 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 IL13RA1P78552 427 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 ST3GAL4Q11206 333 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 TMEM42Q69YG0 159 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 RBMS3Q6XE24 437 aaKnown RBP6.95□□□□□ -1.3
PSEN1-209ENST00000553855 Q6ZSR3 168 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 WDR86Q86TI4 376 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 MKXQ8IYA7 352 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 CMTM4Q8IZR5 234 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 DNAAF1Q8NEP3 725 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 OR5D14Q8NGL3 314 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 GPR148Q8TDV2 347 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF418Q8TF45 676 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-209ENST00000553855 HPSE2Q8WWQ2 592 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 AQP3Q92482 292 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 FGGYQ96C11 551 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 CCL13Q99616 98 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 NUDT16L1Q9BRJ7 211 aaKnown RBP6.95□□□□□ -1.3
PSEN1-209ENST00000553855 PKIBQ9C010 78 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 CHST5Q9GZS9 411 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 Q9H521 79 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 PPP1R3EQ9H7J1 279 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 SNTG1Q9NSN8 517 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 BABAM2Q9NXR7 383 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 KAAG1Q9UBP8 84 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 GLS2Q9UI32 602 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 TPRKBQ9Y3C4 175 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 INSIG2Q9Y5U4 225 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 DYSFO75923 2080 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
PSEN1-209ENST00000553855 IGHV2-70DA0A0C4DH43 119 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 A0A1W2PPH5 198 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 PQLC2LA1A4F0 135 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 OR2AT4A6NND4 320 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 TRAPPC2LH3BP13 241 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 SLC1A7O00341 560 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 DVL1O14640 695 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 PLATP00750 562 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 LPLP06858 475 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 HCKP08631 526 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 NDUFB7P17568 137 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 EGR1P18146 543 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 ATF1P18846 271 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
PSEN1-209ENST00000553855 ZFP36P26651 326 aaKnown RBP6.94□□□□□ -1.3
PSEN1-209ENST00000553855 POU3F4P49335 361 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 ETV1P50549 477 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 AQP4P55087 323 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 MTCP1P56278 107 aa6.94□□□□□ -1.3
PSEN1-209ENST00000553855 SEC61A1P61619 476 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms