RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 HDHD2Q9H0R4 259 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 CMC2Q9NRP2 79 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 TMEM100Q9NV29 134 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 CYB5R1Q9UHQ9 305 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 ENOPH1Q9UHY7 261 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 KCNG2Q9UJ96 466 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 GMPPBQ9Y5P6 360 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 MAST4O15021 2626 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 F8P00451 2351 aa3.95□□□□□ -1.78
ATXN3-222ENST00000553570 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 IGHV1-69-2A0A0G2JMI3 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 hCG_1809904A0A1W2PP81 198 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 A0A1W2PPE2 198 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LOC390937A0A1W2PQ73 354 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 A0A1W2PR64 198 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LRP5LA4QPB2 252 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF670-ZNF695F2Z2N8 137 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 H0YL77 283 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 H3BSH0 61 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 H7C417 338 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 M0R135 149 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 UBE2CO00762 179 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 EI24O14681 340 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 MAGEB4O15481 346 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE7O76087 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 RPP14O95059 124 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 SNAP29O95721 258 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 IGHV3-13P01766 116 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 HLA-DPB1P04440 258 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LYNP07948 512 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ACSM4P0C7M7 580 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE12FP0CL80 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE12GP0CL81 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE12IP0CL82 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 COX5BP10606 129 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF250P15622 560 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 USF1P22415 310 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 EPHA2P29317 976 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 RBMXP38159 391 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GPR6P46095 362 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 CX3CR1P49238 355 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 EVX1P49640 407 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 RGS6P49758 472 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 PPOXP50336 477 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 CDC42P60953 191 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GRB2P62993 217 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 PPP2R2BQ00005 443 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE1Q13065 139 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GAGE4Q13068 117 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 RCN1Q15293 331 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 OR8G1Q15617 311 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 TRIP10Q15642 601 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ODF4Q2M2E3 257 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 HFEQ30201 348 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 AVPI1Q5T686 147 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LPCAT4Q643R3 524 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 KDM4DQ6B0I6 523 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LRRN1Q6UXK5 716 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 PGAP1Q75T13 922 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 C1orf174Q8IYL3 243 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 YIPF7Q8N8F6 280 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF540Q8NDQ6 660 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 OR10H4Q8NGA5 316 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 OR2AE1Q8NHA4 323 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 FAM81AQ8TBF8 368 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 FAM216AQ8WUB2 273 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 CYGBQ8WWM9 190 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 RDH5Q92781 318 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 HAVCR1Q96D42 359 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 DUS3LQ96G46 650 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF799Q96GE5 643 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 DDOQ99489 341 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 GFI1Q99684 422 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 COQ7Q99807 217 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 APOL4Q9BPW4 351 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 NMNAT2Q9BZQ4 307 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 SP140LQ9H930 580 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 LPAR2Q9HBW0 351 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 SLC25A19Q9HC21 320 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 UFSP2Q9NUQ7 469 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 CLN6Q9NWW5 311 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 UBAP1Q9NZ09 502 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 PURGQ9UJV8 347 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 COMMD3-BMI1R4GMX3 469 aa3.94□□□□□ -1.78
ATXN3-222ENST00000553570 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
ATXN3-222ENST00000553570 ANKRD30BLA7E2S9 258 aa3.93□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF878C9JN71 531 aa3.93□□□□□ -1.78
ATXN3-222ENST00000553570 F5H5P2 479 aa3.93□□□□□ -1.78
ATXN3-222ENST00000553570 TGFAP01135 160 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms