RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 VCX3BQ9H321 246 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 SNTG1Q9NSN8 517 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 SLC22A13Q9Y226 551 aa9.66□□□□□ -0.86
SRP54-203ENST00000553544 TET2Q6N021 2002 aaPredicted RBP9.66□□□□□ -0.86
SRP54-203ENST00000553544 LOC100130705A0A1B0GUX0 176 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ERICH4A6NGS2 130 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 DLGAP1O14490 977 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 NDUFB3O43676 98 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 SULT1C4O75897 302 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 APOL3O95236 402 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 PAHP00439 452 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 NRASP01111 189 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 KRT8P05787 483 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ACAA1P09110 424 aaPredicted RBP9.65□□□□□ -0.86
SRP54-203ENST00000553544 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 SELLP14151 372 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 GLRA1P23415 457 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 KIR2DS4P43632 304 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ISL1P61371 349 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 GUCA2AQ02747 115 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 EMX1Q04741 257 aaPredicted RBP9.65□□□□□ -0.86
SRP54-203ENST00000553544 CLVS2Q5SYC1 327 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 BCL2L15Q5TBC7 163 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 VMO1Q7Z5L0 202 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 COMMD2Q86X83 199 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 CATSPERDQ86XM0 798 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 C8orf46Q8TAG6 207 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ZNF671Q8TAW3 534 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 CFHR4Q92496 578 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 RORBQ92753 470 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
SRP54-203ENST00000553544 GAFA1Q96PS6 74 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 TBX5Q99593 518 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 DCTN5Q9BTE1 182 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ZNRD1Q9P1U0 126 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 NLKQ9UBE8 527 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 DNAJB11Q9UBS4 358 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 ZNF222Q9UK12 451 aa9.65□□□□□ -0.86
SRP54-203ENST00000553544 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 IRGMA1A4Y4 181 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 METTL15A6NJ78 407 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 OR2AT4A6NND4 320 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 J3QRE1 110 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 SIGLEC5O15389 551 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 SLC16A6O15403 523 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 NOS1APO75052 506 aaPredicted RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 RPP14O95059 124 aaKnown RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 TFF1P04155 84 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 PSG2P11465 335 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 CAV3P56539 151 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 GMFBP60983 142 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 ZNF85Q03923 595 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 IL18R1Q13478 541 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 DGUOKQ16854 277 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 ZIK1Q3SY52 487 aaPredicted RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 LRRC10Q5BKY1 277 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 PLCXD3Q63HM9 321 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 HAGHLQ6PII5 290 aaPredicted RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 METAP1DQ6UB28 335 aaPredicted RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 CMTM4Q8IZR5 234 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 YIPF7Q8N8F6 280 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 DTX3Q8N9I9 347 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 OR10H4Q8NGA5 316 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 OR4S1Q8NGB4 309 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 HAVCR2Q8TDQ0 301 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 MED30Q96HR3 178 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 AURKAIP1Q9NWT8 199 aaPredicted RBP9.64□□□□□ -0.87
SRP54-203ENST00000553544 RASL12Q9NYN1 266 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 ONECUT1Q9UBC0 465 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 FOXJ3Q9UPW0 622 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 SIGLEC9Q9Y336 463 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 MAB21L2Q9Y586 359 aa9.64□□□□□ -0.87
SRP54-203ENST00000553544 PQLC2LA1A4F0 135 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 A6NIN4 97 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 CASQ2O14958 399 aaPredicted RBP9.63□□□□□ -0.87
SRP54-203ENST00000553544 NPFFO15130 113 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 ENTPD6O75354 484 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 RPSAP08865 295 aaKnown RBP9.63□□□□□ -0.87
SRP54-203ENST00000553544 PGA5P0DJD9 388 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 GABRB1P18505 474 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 MPZP25189 248 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 EFNB2P52799 333 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 ACTA2P62736 377 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 ACTG2P63267 376 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 IKZF1Q13422 519 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 MED21Q13503 144 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 C1orf122Q6ZSJ8 110 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 ZNF573Q86YE8 665 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 PRSS35Q8N3Z0 413 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 Q8N7P7 452 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 POC1AQ8NBT0 407 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 CCDC54Q8NEL0 328 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 OR2T6Q8NHC8 308 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 FAM234AQ9H0X4 552 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 INPP5EQ9NRR6 644 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 GPR173Q9NS66 373 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms