RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ABHD6Q9BV23 337 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 RBM4Q9BWF3 364 aaKnown RBP3.95□□□□□ -1.78
ATXN3-220ENST00000553491 OSBPL10Q9BXB5 764 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 EGLN1Q9GZT9 426 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 RACGAP1Q9H0H5 632 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 HDHD2Q9H0R4 259 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 BATF3Q9NR55 127 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CMC2Q9NRP2 79 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM100Q9NV29 134 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 CYB5R1Q9UHQ9 305 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 ENOPH1Q9UHY7 261 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 KCNG2Q9UJ96 466 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 GMPPBQ9Y5P6 360 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 MAST4O15021 2626 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 F8P00451 2351 aa3.95□□□□□ -1.78
ATXN3-220ENST00000553491 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV1-69-2A0A0G2JMI3 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 hCG_1809904A0A1W2PP81 198 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 A0A1W2PPE2 198 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LOC390937A0A1W2PQ73 354 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 A0A1W2PR64 198 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LRP5LA4QPB2 252 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF670-ZNF695F2Z2N8 137 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 H0YL77 283 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 H3BSH0 61 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 H7C417 338 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 M0R135 149 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 UBE2CO00762 179 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 EI24O14681 340 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 MAGEB4O15481 346 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE7O76087 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 RPP14O95059 124 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 SNAP29O95721 258 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV3-13P01766 116 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 HLA-DPB1P04440 258 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LYNP07948 512 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ACSM4P0C7M7 580 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE12FP0CL80 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE12GP0CL81 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE12IP0CL82 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 COX5BP10606 129 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF250P15622 560 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 USF1P22415 310 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 EPHA2P29317 976 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 RBMXP38159 391 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GPR6P46095 362 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 CX3CR1P49238 355 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 EVX1P49640 407 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 RGS6P49758 472 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 PPOXP50336 477 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 CDC42P60953 191 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GRB2P62993 217 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 PPP2R2BQ00005 443 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE1Q13065 139 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GAGE4Q13068 117 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 RCN1Q15293 331 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 OR8G1Q15617 311 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 TRIP10Q15642 601 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ODF4Q2M2E3 257 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 HFEQ30201 348 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 AVPI1Q5T686 147 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LPCAT4Q643R3 524 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 KDM4DQ6B0I6 523 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LRRN1Q6UXK5 716 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 PGAP1Q75T13 922 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 C1orf174Q8IYL3 243 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 YIPF7Q8N8F6 280 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF540Q8NDQ6 660 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 OR10H4Q8NGA5 316 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 OR2AE1Q8NHA4 323 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 FAM81AQ8TBF8 368 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 FAM216AQ8WUB2 273 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 CYGBQ8WWM9 190 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 RDH5Q92781 318 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 HAVCR1Q96D42 359 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 DUS3LQ96G46 650 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF799Q96GE5 643 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 DDOQ99489 341 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 GFI1Q99684 422 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 COQ7Q99807 217 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 APOL4Q9BPW4 351 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 NMNAT2Q9BZQ4 307 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 SP140LQ9H930 580 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 LPAR2Q9HBW0 351 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 SLC25A19Q9HC21 320 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 UFSP2Q9NUQ7 469 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 CLN6Q9NWW5 311 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 UBAP1Q9NZ09 502 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 PURGQ9UJV8 347 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms