RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 BCL2L14Q9BZR8 327 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 SP140LQ9H930 580 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 ELOVL3Q9HB03 270 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 CDH20Q9HBT6 801 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 FAM206AQ9NX38 181 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 ERVK-18Q9QC07 812 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 EIF3KQ9UBQ5 218 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 CLEC2DQ9UHP7 191 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 GNG8Q9UK08 70 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 IKZF2Q9UKS7 526 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 RNF115Q9Y4L5 304 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
DEPDC4-210ENST00000551642 TMEM269A0A1B0GVZ9 245 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 LRP5LA4QPB2 252 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 TRIM64CA6NLI5 447 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 SHISA9B4DS77 424 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 LOC110117498-PIK3R3F6TDL0 507 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 H3BSA7 217 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 J3QLW9 94 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 MYL12BO14950 172 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 MAGEB4O15481 346 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 PNPP00491 289 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 MT-ND2P03891 347 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 RPSAP08865 295 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF19P17023 458 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 CCNOP22674 350 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 GLRXP35754 106 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 TGM4P49221 684 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 CCR9P51686 369 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 PRKXP51817 358 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 WNT4P56705 351 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF121P58317 390 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 SPOCK1Q08629 439 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF829Q3KNS6 432 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 CCDC58Q4VC31 144 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 TP53I3Q53FA7 332 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 OR2G6Q5TZ20 316 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF773Q6PK81 442 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 SLC22A25Q6T423 547 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 NAA40Q86UY6 237 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF101Q8IZC7 436 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF283Q8N7M2 679 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 YIPF7Q8N8F6 280 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 OR52H1Q8NGJ2 320 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 OR5L1Q8NGL2 311 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 RPS4Y2Q8TD47 263 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 SPRYD4Q8WW59 207 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 RORBQ92753 470 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ITFG2Q969R8 447 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 PELI1Q96FA3 418 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 KCNS3Q9BQ31 491 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 TTTY10Q9BZA0 68 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF442Q9H7R0 627 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 MOB1AQ9H8S9 216 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ISG20L2Q9H9L3 353 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 FN3KRPQ9HA64 309 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ISYNA1Q9NPH2 558 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ACOT13Q9NPJ3 140 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 G6PC2Q9NQR9 355 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ACOXLQ9NUZ1 547 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 BABAM2Q9NXR7 383 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF391Q9UJN7 358 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 ERGIC3Q9Y282 383 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 LSM2Q9Y333 95 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 GRIP1Q9Y3R0 1128 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 SNX5Q9Y5X3 404 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 R4GMQ9 66 aa5.41□□□□□ -1.54
DEPDC4-210ENST00000551642 A0A0U1RQV5 110 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ATP6V1G2-DDX39BF2Z307 99 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 OGG1O15527 345 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 XRCC2O43543 280 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 RPP14O95059 124 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 NGFP01138 241 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 IGLV3-1P01715 115 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 LCATP04180 440 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ISG15P05161 165 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF250P15622 560 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 PCMT1P22061 227 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 CFL1P23528 166 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 CDH15P55291 814 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 TAS2R43P59537 309 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 PPP1CBP62140 327 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 RPS23P62266 143 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 BDH1Q02338 343 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 EMX1Q04741 257 aaPredicted RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 MFGE8Q08431 387 aaPredicted RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 SNTB2Q13425 540 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ALKBH1Q13686 389 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 SPHARQ15513 63 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 GFOD2Q3B7J2 385 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 SNAI3Q3KNW1 292 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 UBE2UQ5VVX9 321 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF544Q6NX49 715 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 RPL22L1Q6P5R6 122 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 FBXW12Q6X9E4 464 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 Q6ZSR3 168 aa5.4□□□□□ -1.54
DEPDC4-210ENST00000551642 RFPL4BQ6ZWI9 263 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms