RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DEFB121Q5J5C9 76 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 TEX30Q5JUR7 227 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 PLCXD3Q63HM9 321 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 METAP1DQ6UB28 335 aaPredicted RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 ACP7Q6ZNF0 438 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 ASRGL1Q7L266 308 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 RNF144BQ7Z419 303 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 OR2T33Q8NG76 320 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 OR10G2Q8NGC3 310 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 OR5R1Q8NH85 324 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM81AQ8TBF8 368 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 CHAC2Q8WUX2 184 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 AQP3Q92482 292 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 CMTM5Q96DZ9 223 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 MED30Q96HR3 178 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 FEVQ99581 238 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 TEAD3Q99594 435 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 APOL4Q9BPW4 351 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 NIPAL2Q9H841 368 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 GPR84Q9NQS5 396 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 CMC2Q9NRP2 79 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 MAGEL2Q9UJ55 1249 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 PIGLQ9Y2B2 252 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 CAB39Q9Y376 341 aaPredicted RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 NOP16Q9Y3C1 178 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 SAMHD1Q9Y3Z3 626 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 A6NDX4 124 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 M0R1W7 72 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 APOL3O95236 402 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CST4P01036 141 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 IGHV3-7P01780 117 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 LYNP07948 512 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 ZNF3P17036 446 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 HAAOP46952 286 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MECP2P51608 486 aaKnown RBP5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 HMGA2P52926 109 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 DLX6P56179 175 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CAV3P56539 151 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 EDDM3BP56851 147 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 ESRRGP62508 458 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 IL5RAQ01344 420 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 COL10A1Q03692 680 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MZT1Q08AG7 82 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 ACSM1Q08AH1 577 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 APOFQ13790 326 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MICAQ29983 383 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 SAMD4BQ5PRF9 694 aaKnown RBP5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 NCR3LG1Q68D85 454 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 TCF23Q7RTU1 214 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 TRPM8Q7Z2W7 1104 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 KRT77Q7Z794 578 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CALHM1Q8IU99 346 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 PGAM4Q8N0Y7 254 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 ASCC1Q8N9N2 400 aaKnown RBP5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CSNK2A3Q8NEV1 391 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 OR10Z1Q8NGY1 313 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 OTOSQ8NHW6 89 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC124Q96CT7 223 aaKnown RBP5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 DUX3Q96PT4 197 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 HIST1H2AAQ96QV6 131 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 OR8B4Q96RC9 309 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CHST6Q9GZX3 395 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 PBOV1Q9GZY1 135 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC134Q9H6E4 229 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 ARGLU1Q9NWB6 273 aaPredicted RBP5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM206AQ9NX38 181 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM53CQ9NYF3 392 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC22A13Q9Y226 551 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 MPC1Q9Y5U8 109 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
PRPF40B-214ENST00000551320 IGKV1-27A0A075B6S5 117 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TMEM269A0A1B0GVZ9 245 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM230AA0A1W2PPH8 454 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC182A6NF36 153 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 PRR23D1E9PI22 279 aaPredicted RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SNX3O60493 162 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 MTRF1O75570 445 aaKnown RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TIPRLO75663 272 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 KRT36O76013 467 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 NXPH2O95156 264 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 IFNGP01579 166 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 PRR23D2P0DMB1 279 aaPredicted RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 ALOX5APP20292 161 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC2A5P22732 501 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 LGALS4P56470 323 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 GNG3P63215 75 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SRSF3P84103 164 aaKnown RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC34A1Q06495 639 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 BLMHQ13867 455 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 CEACAM21Q3KPI0 293 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM76BQ5HYJ3 339 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 XP32Q5T750 250 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 OR2T5Q6IEZ7 315 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SHFQ7M4L6 423 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms