RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 COCHO43405 550 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 SEMA3DO95025 777 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GP1BAP07359 652 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 ACSM4P0C7M7 580 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CISD3P0C7P0 127 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GKN3PP0CG01 181 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 UBCP0CG48 685 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 RAB4AP20338 218 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 SLC26A3P40879 764 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CDKN2CP42773 168 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 TAF6P49848 677 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 EMP2P54851 167 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CLDN18P56856 261 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 DSCR10P59022 87 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 STXBP1P61764 594 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF92Q03936 586 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 STX3Q13277 289 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 AQP6Q13520 282 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CAPRIN1Q14444 709 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 PRPSAP1Q14558 356 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GOLGA7BQ2TAP0 167 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 PTPN20Q4JDL3 420 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CDKL4Q5MAI5 379 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CCNJQ5T5M9 372 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 FAM151BQ6UXP7 276 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 SLC35D2Q76EJ3 337 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 PAGE2Q7Z2X7 111 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 C10orf67Q8IYJ2 551 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 LYG1Q8N1E2 194 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 ZADH2Q8N4Q0 377 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 JAGN1Q8N5M9 183 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 NECAP1Q8NC96 275 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM161BQ8NDZ6 487 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF680Q8NEM1 530 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GEMIN6Q8WXD5 167 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 PIK3IP1Q96FE7 263 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 PKMYT1Q99640 499 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 RASL11BQ9BPW5 248 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 SRMSQ9H3Y6 488 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 BEX1Q9HBH7 125 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 LYRM4Q9HD34 91 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 TREX1Q9NSU2 369 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 TAS2R7Q9NYW3 318 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CCDC59Q9P031 241 aaKnown RBP3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CLN8Q9UBY8 286 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 LGALS13Q9UHV8 139 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 CDH10Q9Y6N8 788 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 V9GYQ6 96 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 ANAPC1Q9H1A4 1944 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TRBV9A0A0B4J1U6 114 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF816-ZNF321PA0A0X1KG74 233 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 FAM231BA6NCW3 169 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 E5RI56 91 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 H3BNH8 94 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 LIN7AO14910 233 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 MRPS12O15235 138 aaKnown RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 HCRTO43612 131 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 AIREO43918 545 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 FAM189A1O60320 539 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 EIF4E2O60573 245 aaKnown RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 NDUFS6O75380 124 aaKnown RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TNFSF13O75888 250 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 CSF3P09919 207 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 MGMTP16455 207 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 AK4P27144 223 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 REEP5Q00765 189 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 PMS2P3Q13401 168 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 LRRC10Q5BKY1 277 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 OR52W1Q6IF63 320 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ABHD12BQ7Z5M8 362 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 BBS7Q8IWZ6 715 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM61Q8N0U2 210 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 PRELID2Q8N945 189 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 OR2L5Q8NG80 312 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 OR51L1Q8NGJ5 315 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 OR9G4Q8NGQ1 327 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 GTF2H4Q92759 462 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM54Q969K7 222 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 SLC35B4Q969S0 331 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 DNAJC1Q96KC8 554 aaKnown RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 JSRP1Q96MG2 331 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 NAPGQ99747 312 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 CTRCQ99895 268 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ECSITQ9BQ95 431 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 POTEKPQ9BYX7 375 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 PRRG3Q9BZD7 231 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ZYG11BQ9C0D3 744 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ACTR3CQ9C0K3 210 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 C6orf62Q9GZU0 229 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TRIM45Q9H8W5 580 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-206ENST00000550987 C12orf10Q9HB07 376 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 KCNJ16Q9NPI9 418 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 MRPL40Q9NQ50 206 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms