RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TOX3O15405 576 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SOCS1O15524 211 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SHOX2O60902 331 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 GLSO94925 669 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 YIF1AO95070 293 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 PAX6P26367 422 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 PSMB5P28074 263 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 RPA3P35244 121 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 EMP2P54851 167 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 PLTPP55058 493 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 UBE2G2P60604 165 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 IL5RAQ01344 420 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 PIGHQ14442 188 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 TRAM1Q15629 374 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 C6orf99Q4VX62 202 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 KDM4DQ6B0I6 523 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 TMEM205Q6UW68 189 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 RNF10Q8N5U6 811 aaKnown RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 OR8G5Q8NG78 346 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 OR5AK3PQ8NH89 298 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 ENKURQ8TC29 256 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SFXN5Q8TD22 340 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 DCAKDQ8WVC6 231 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 CDS1Q92903 461 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 MRPL48Q96GC5 212 aaKnown RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SNF8Q96H20 258 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 KCNS1Q96KK3 526 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 BMFQ96LC9 184 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 UPF3BQ9BZI7 483 aaKnown RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SHCBP1LQ9BZQ2 653 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 NXF2Q9GZY0 626 aaKnown RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 WDR54Q9H977 334 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 SLC38A10Q9HBR0 1119 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 ABCB9Q9NP78 766 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 IFT46Q9NQC8 304 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 NKIRAS1Q9NYS0 192 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 ANXA10Q9UJ72 324 aa1.83□□□□□ -2.12
CCDC38-208ENST00000549876 BRCA1P38398 1863 aaKnown RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 NPHP4O75161 1426 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-208ENST00000549876 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 A0A0A6YYH2 397 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 A6NJ64 397 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF705GA8MUZ8 300 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 BPY2O14599 106 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 UBDO15205 165 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 AQP9O43315 295 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 NDUFS5O43920 106 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 GCM2O75603 506 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 MYO1DO94832 1006 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 IGKV1D-16P01601 117 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 MT-ND4P03905 459 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 S100A6P06703 90 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 RD3LP0DJH9 198 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF35P13682 527 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 HLA-GP17693 338 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 NPY1RP25929 384 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 TUFMP49411 452 aaKnown RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 PSMB2P49721 201 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 RAP1AP62834 184 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 CDK5Q00535 292 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 PRKCDQ05655 676 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 CYP24A1Q07973 514 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 LAMTOR4Q0VGL1 99 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 RAB31Q13636 194 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 TRIP13Q15645 432 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 CEACAM21Q3KPI0 293 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 FBXL19-AS1Q494R0 122 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 TIMM23BQ5SRD1 257 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OPN5Q6U736 354 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 SLC16A13Q7RTY0 426 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 NEGR1Q7Z3B1 354 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 MDP1Q86V88 176 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 PLCZ1Q86YW0 608 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 CALHM1Q8IU99 346 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 BBS7Q8IWZ6 715 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 BOD1L2Q8IYS8 172 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR1J4Q8NGS1 313 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR6N1Q8NGY5 312 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR52P1PQ8NH57 321 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 COQ8AQ8NI60 647 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 RNASEH2CQ8TDP1 164 aaKnown RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 HGDQ93099 445 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 CCDC127Q96BQ5 260 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF488Q96MN9 340 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 ALS2CR12Q96Q35 445 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR2M4Q96R27 311 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR4K3Q96R72 315 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 C7orf50Q9BRJ6 194 aaKnown RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 OR52D1Q9H346 318 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 DSN1Q9H410 356 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 TMEM100Q9NV29 134 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 IMP3Q9NV31 184 aaKnown RBP1.82□□□□□ -2.12
CCDC38-208ENST00000549876 DNAJC27Q9NZQ0 273 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 PPIL1Q9Y3C6 166 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 ORC6Q9Y5N6 252 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 MYO3BQ8WXR4 1341 aa1.82□□□□□ -2.12
CCDC38-208ENST00000549876 IGHV6-1A0A0B4J1U7 121 aa1.81□□□□□ -2.12
CCDC38-208ENST00000549876 A0A1W2PRG6 482 aa1.81□□□□□ -2.12
CCDC38-208ENST00000549876 ISPDA4D126 451 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms