RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 CYB5AP00167 134 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 PPIAL4FP0DN26 164 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 GLRA1P23415 457 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 PTGFRP43088 359 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 NPBWR2P48146 333 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 SLC16A12Q6ZSM3 486 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 PNLDC1Q8NA58 520 aaKnown RBP17.77■□□□□ 0.44
VPS29-206ENST00000549578 CEP19Q96LK0 163 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 PPIAL4AQ9Y536 164 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 NOS1APO75052 506 aaPredicted RBP17.77■□□□□ 0.43
VPS29-206ENST00000549578 BCL3P20749 454 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 OR10A3P58181 314 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 GLT8D1Q68CQ7 371 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 ANKRD13BQ86YJ7 626 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 CDH26Q8IXH8 852 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 OR4D6Q8NGJ1 314 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 SMURF1Q9HCE7 757 aa17.77■□□□□ 0.43
VPS29-206ENST00000549578 OOEPA6NGQ2 149 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 TRAPPC2LH3BP13 241 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 LGALS8O00214 317 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 NXPH2O95156 264 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 CDRT1O95170 752 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 ACAA1P09110 424 aaPredicted RBP17.76■□□□□ 0.43
VPS29-206ENST00000549578 SLC25A16P16260 332 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 SDC2P34741 201 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 MTNR1BP49286 362 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 ERVK11-1P61568 191 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 SAXO1Q8IYX7 474 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 ZSCAN4Q8NAM6 433 aaPredicted RBP17.76■□□□□ 0.43
VPS29-206ENST00000549578 UQCC2Q9BRT2 126 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 ELL3Q9HB65 397 aaPredicted RBP17.76■□□□□ 0.43
VPS29-206ENST00000549578 TMEM165Q9HC07 324 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 RBFOX1Q9NWB1 397 aaKnown RBP17.76■□□□□ 0.43
VPS29-206ENST00000549578 DNAJB11Q9UBS4 358 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 ITPR3Q14573 2671 aa17.76■□□□□ 0.43
VPS29-206ENST00000549578 IGHV4-61A0A0C4DH41 118 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 PDCD5O14737 125 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 SFTPBP07988 381 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 CALCBP10092 127 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 RAB3BP20337 219 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 MDH2P40926 338 aaKnown RBP17.75■□□□□ 0.43
VPS29-206ENST00000549578 NCS1P62166 190 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 MXD1Q05195 221 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 TEX36Q5VZQ5 186 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 ACP7Q6ZNF0 438 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 NR2C2APQ86WQ0 139 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 LRRC28Q86X40 367 aaPredicted RBP17.75■□□□□ 0.43
VPS29-206ENST00000549578 FAM90A1Q86YD7 464 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 CLVS1Q8IUQ0 354 aaPredicted RBP17.75■□□□□ 0.43
VPS29-206ENST00000549578 PXT1Q8NFP0 134 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 OR5T2Q8NGG2 359 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 OR10K1Q8NGX5 313 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 FOXRED1Q96CU9 486 aaPredicted RBP17.75■□□□□ 0.43
VPS29-206ENST00000549578 ING4Q9UNL4 249 aa17.75■□□□□ 0.43
VPS29-206ENST00000549578 MRPS28Q9Y2Q9 187 aaKnown RBP17.75■□□□□ 0.43
VPS29-206ENST00000549578 RNF223E7ERA6 249 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 KDM4BO94953 1096 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 GABARAPO95166 117 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 CLEC2LP0C7M8 214 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 VBP1P61758 197 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 MICBQ29980 383 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 ZNF404Q494X3 552 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 C1orf100Q5SVJ3 147 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 AWAT2Q6E213 333 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 GAL3ST1Q99999 423 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 TMEM246Q9BRR3 403 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 PLGRKTQ9HBL7 147 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 HES4Q9HCC6 221 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 V9GY05 133 aa17.74■□□□□ 0.43
VPS29-206ENST00000549578 TRAV38-1A0A0B4J264 116 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 GYPAP02724 150 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 CD37P11049 281 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 RSU1Q15404 277 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 CTF1Q16619 201 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 SMIM21Q3B7S5 101 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 GLIPR1L1Q6UWM5 242 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 ASCL4Q6XD76 172 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 Q8IYB0 196 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 EMG1Q92979 244 aaKnown RBP17.73■□□□□ 0.43
VPS29-206ENST00000549578 REG4Q9BYZ8 158 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 RASL12Q9NYN1 266 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 NLKQ9UBE8 527 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 IL36RNQ9UBH0 155 aa17.73■□□□□ 0.43
VPS29-206ENST00000549578 A0A096LNT2 108 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 FSTL3O95633 263 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 TFF1P04155 84 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 MUC1P15941 1255 aaPredicted RBP17.72■□□□□ 0.43
VPS29-206ENST00000549578 CAV3P56539 151 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 TPRA1Q86W33 373 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 MUC20Q8N307 709 aaPredicted RBP17.72■□□□□ 0.43
VPS29-206ENST00000549578 OR6M1Q8NGM8 313 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 CLDND2Q8NHS1 167 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 S100A13Q99584 98 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 METTL9Q9H1A3 318 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 A0A0G2JK05 382 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 SLC17A2O00624 439 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 SLC22A1O15245 554 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 PRKACAP17612 351 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 HTR2CP28335 458 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 PSMD7P51665 324 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms