RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GABARAPL1Q9H0R8 117 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 FBLN5Q9UBX5 448 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 A6NIN4 97 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 BMXP51813 675 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 EFNB2P52799 333 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 ERVK11-1P61568 191 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 LY6EQ16553 131 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 GID4Q8IVV7 300 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 OR4M1Q8NGD0 313 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 IL4I1Q96RQ9 567 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 MEGF9Q9H1U4 602 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 USE1Q9NZ43 259 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 SLC22A13Q9Y226 551 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 SIGLEC9Q9Y336 463 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 SNX5Q9Y5X3 404 aa14.13□□□□□ -0.15
CHMP1A-205ENST00000548650 A0A1W2PPH5 198 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 CHST1O43916 411 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 TK1P04183 234 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 COX7A1P24310 79 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 DLX6P56179 175 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 ERVFRD-1P60508 538 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 ACTR3P61158 418 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 IL24Q13007 206 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 PKIBQ9C010 78 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 FAM234AQ9H0X4 552 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 RANBP3Q9H6Z4 567 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 H2AFY2Q9P0M6 372 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 OR14J1Q9UGF5 321 aa14.12□□□□□ -0.15
CHMP1A-205ENST00000548650 G3V2T6 193 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 KRT8P05787 483 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 ZNF782Q6ZMW2 699 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 ANGPTL5Q86XS5 388 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 FAM110DQ8TAY7 271 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 TRMT10AQ8TBZ6 339 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 TBX5Q99593 518 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 CIB1Q99828 191 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 HEXA-AS1Q9H8Q6 139 aa14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 WARS2Q9UGM6 360 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-205ENST00000548650 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 A0A1W2PQL4 384 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 F8VVB4 439 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 F8VWA3 439 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 ZNF737O75373 536 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 RPP14O95059 124 aaKnown RBP14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 PIPP12273 146 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 KIR2DS4P43632 304 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 HERPUD1Q15011 391 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 LHFPL4Q7Z7J7 247 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 CATSPERDQ86XM0 798 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 ZDHHC13Q8IUH4 622 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 YIPF7Q8N8F6 280 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 OR2T27Q8NH04 317 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 PIFOQ8TCI5 191 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 CHST5Q9GZS9 411 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 PLEKHA1Q9HB21 404 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 RAB18Q9NP72 206 aa14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHMP1A-205ENST00000548650 hCG_1809904A0A1W2PP81 198 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 A0A1W2PPE2 198 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 A0A1W2PR64 198 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 A0A1W2PRV1 198 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 FAM90A8PA6NJQ4 464 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 C17orf98A8MV24 154 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 ODF3BA8MYP8 253 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 H3BSH0 61 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 K7N7A8 449 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 APOL3O95236 402 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 CSF1P09603 554 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 FASP25445 335 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 HTR1FP30939 366 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 COL10A1Q03692 680 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 UBE2V2Q15819 145 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 C11orf88Q6PI97 169 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 LIAT1Q6ZQX7 453 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 TCF23Q7RTU1 214 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 C1QL4Q86Z23 238 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 DYNAPQ8N1N2 210 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 KLHDC1Q8N7A1 406 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 ASCC1Q8N9N2 400 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 GABARAPL3Q9BY60 117 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 MTCH1Q9NZJ7 389 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 ENOPH1Q9UHY7 261 aa14.09□□□□□ -0.15
CHMP1A-205ENST00000548650 PLXNB1O43157 2135 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 FAM230AA0A1W2PPH8 454 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 VGLL3A8MV65 326 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 SYT7O43581 403 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 OR2T7P0C7T2 308 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 POLR2IP36954 125 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 BNIP1Q12981 228 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 HIST2H2BDQ6DRA6 164 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 Q6ZTK2 550 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 AMIGO2Q86SJ2 522 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 OR2T6Q8NHC8 308 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 CFHR4Q92496 578 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 CEP19Q96LK0 163 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 NPFFR1Q9GZQ6 430 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 FOXJ3Q9UPW0 622 aa14.08□□□□□ -0.16
CHMP1A-205ENST00000548650 LOC107986453A0A1B0GWG9 222 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms