RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 LIPFP07098 398 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 PPIAL4GP0DN37 164 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 PRKACBP22694 351 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 C21orf33P30042 268 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 ATP1B3P54709 279 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 MTCP1P56278 107 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 FGF12P61328 243 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 ERVK11-1P61568 191 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 SRSF2Q01130 221 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 DGUOKQ16854 277 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 LRRC10Q5BKY1 277 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 STX19Q8N4C7 294 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 PNLDC1Q8NA58 520 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNF485Q8NCK3 441 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 OR13C9Q8NGT0 318 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 TSEN15Q8WW01 171 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 RGP1Q92546 391 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 SPSB1Q96BD6 273 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 UPRTQ96BW1 309 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 HES4Q9HCC6 221 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 FKBP14Q9NWM8 211 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 MTCH1Q9NZJ7 389 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 RPUSD1Q9UJJ7 312 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 DHDHQ9UQ10 334 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 MAB21L2Q9Y586 359 aa15.5■□□□□ 0.07
PRPF40B-206ENST00000547764 RFPL4AA6NLU0 287 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 RFPL4AL1F8VTS6 287 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 OGG1O15527 345 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 TCF21O43680 179 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 RIPK1Q13546 671 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 C6orf141Q5SZD1 244 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 SLC25A26Q70HW3 274 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 PARP16Q8N5Y8 322 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 CD177Q8N6Q3 437 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNRF1Q8ND25 227 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 SLAMF9Q96A28 289 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 SDSLQ96GA7 329 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 OPALINQ96PE5 141 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 ZCCHC4Q9H5U6 513 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 SLC25A10Q9UBX3 287 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 NUP50Q9UKX7 468 aa15.49■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNF879B4DU55 563 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 F8VVB4 439 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 F8VWA3 439 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 GPR37O15354 613 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 INMTO95050 263 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 ATP6V1G2O95670 118 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 MT-ND2P03891 347 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 OCM2P0CE71 109 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 OCMP0CE72 109 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 IZUMO2Q6UXV1 221 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 LHFPL2Q6ZUX7 228 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 SERPINA12Q8IW75 414 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 LY6G5BQ8NDX9 201 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 OR5D14Q8NGL3 314 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 C22orf15Q8WYQ4 148 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 SMIM19Q96E16 107 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 CEP19Q96LK0 163 aa15.48■□□□□ 0.07
PRPF40B-206ENST00000547764 IGHV3OR16-10A0A075B7F0 116 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 SLC1A7O00341 560 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 RGS9O75916 674 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 IGHV4-38-2P0DP08 117 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 NDUFB7P17568 137 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 MYF6P23409 242 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 PRDX2P32119 198 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 SOX2P48431 317 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 POU3F4P49335 361 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 CEBPDP49716 269 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 CAV3P56539 151 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 DMKNQ6E0U4 476 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 RNF144BQ7Z419 303 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 GPR148Q8TDV2 347 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 H1FXQ92522 213 aaKnown RBP15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 SPACA5Q96QH8 159 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 SLC6A7Q99884 636 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 PCGF1Q9BSM1 259 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 DCTN5Q9BTE1 182 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 ANKRD60Q9BZ19 345 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 CNTD2Q9H8S5 307 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNF69Q9UC07 566 aa15.47■□□□□ 0.07
PRPF40B-206ENST00000547764 COL6A5A8TX70 2615 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 PTGES3LE9PB15 166 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 SPRY1O43609 319 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 TOX4O94842 621 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ALX3O95076 343 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 KNG1P01042 644 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 SFTPBP07988 381 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 MMP9P14780 707 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 FPR2P25090 351 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ARF6P62330 175 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 MKXQ8IYA7 352 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 BPIFB2Q8N4F0 458 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ZFP41Q8N8Y5 198 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 TMEM185AQ8NFB2 350 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 C8orf46Q8TAG6 207 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNF418Q8TF45 676 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 GHSRQ92847 366 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 RFT1Q96AA3 541 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 WDFY2Q96P53 400 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 TBX15Q96SF7 602 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms