RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 RBP2P50120 134 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 ERVK11-1P61568 191 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 ARF6P62330 175 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 ADARB1P78563 741 aaKnown RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 TMEM185AQ8NFB2 350 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 ADAT3Q96EY9 351 aaPredicted RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 ZNF48Q96MX3 618 aaPredicted RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
DDX54-204ENST00000546898 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 MAB21L2Q9Y586 359 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 HSPE1-MOB4S4R3N1 261 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 ANK2Q01484 3957 aa13.11□□□□□ -0.31
DDX54-204ENST00000546898 DSCAML1Q8TD84 2053 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 IGKV1-27A0A075B6S5 117 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 DNAJC9-AS1A6NH13 148 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 RFPL4AA6NLU0 287 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 TMEM212A6NML5 194 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 RFPL4AL1F8VTS6 287 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 CLIC3O95833 236 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 KNG1P01042 644 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 TFF1P04155 84 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 LIMS3P0CW19 117 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 LIMS4P0CW20 117 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 PRKACBP22694 351 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 PRTN3P24158 256 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
DDX54-204ENST00000546898 GBX2P52951 348 aaPredicted RBP13.1□□□□□ -0.31
DDX54-204ENST00000546898 ATP1B3P54709 279 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 ACTG1P63261 375 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 BAMBIQ13145 260 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 ANGPTL5Q86XS5 388 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 GATAD2BQ8WXI9 593 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 FGGYQ96C11 551 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 CEP19Q96LK0 163 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 COMMD4Q9H0A8 199 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 VCXQ9H320 206 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 PRDM13Q9H4Q3 707 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 NEK6Q9HC98 313 aa13.1□□□□□ -0.31
DDX54-204ENST00000546898 ANKRD65E5RJM6 399 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 H0YAE9 185 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 CLDN34H7C241 214 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 M0R1W7 72 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 CYB5AP00167 134 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 ATF1P18846 271 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 PRDX2P32119 198 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 CAPGP40121 348 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 METAP1DQ6UB28 335 aaPredicted RBP13.09□□□□□ -0.31
DDX54-204ENST00000546898 C1orf122Q6ZSJ8 110 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 VMO1Q7Z5L0 202 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 Q8IYB0 196 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 CD177Q8N6Q3 437 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 OR51A4Q8NGJ6 313 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 OPALINQ96PE5 141 aa13.09□□□□□ -0.31
DDX54-204ENST00000546898 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
DDX54-204ENST00000546898 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
DDX54-204ENST00000546898 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 IGKV1-9A0A0C4DH69 117 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 A0A1W2PQ09 198 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 ZFPL1O95159 310 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 MT-ND2P03891 347 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 OCM2P0CE71 109 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
DDX54-204ENST00000546898 CAPZA1P52907 286 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 MED21Q13503 144 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 CCDC58Q4VC31 144 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 TMPRSS11AQ6ZMR5 421 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 SLC25A26Q70HW3 274 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 MKXQ8IYA7 352 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 C8orf59Q8N0T1 100 aaPredicted RBP13.08□□□□□ -0.32
DDX54-204ENST00000546898 LHX4Q969G2 390 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
DDX54-204ENST00000546898 FAM234AQ9H0X4 552 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 MTCH1Q9NZJ7 389 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 OR14J1Q9UGF5 321 aa13.08□□□□□ -0.32
DDX54-204ENST00000546898 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
DDX54-204ENST00000546898 TMEM89A2RUT3 159 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 E9PI62 339 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 ALX3O95076 343 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 RNASE1P07998 156 aaKnown RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 MYL12AP19105 171 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 COMPP49747 757 aaPredicted RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 MTCP1P56278 107 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 GUCA2AQ02747 115 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 BLMHQ13867 455 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 DEFB112Q30KQ8 113 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms