RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 RP9Q8TA86 221 aaKnown RBP10.12□□□□□ -0.79
SCAF11-208ENST00000546534 BCAS4Q8TDM0 211 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 CAPSLQ8WWF8 208 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 PRR25Q96S07 402 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 TSSK6Q9BXA6 273 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 MED20Q9H944 212 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 VNN3Q9NY84 501 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 IGHV2-26A0A0B4J1V2 119 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 LCE6AA0A183 80 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 K7N7A8 449 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 NOS1APO75052 506 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-208ENST00000546534 NXPH2O95156 264 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 COX4I1P13073 169 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 GSTT1P30711 240 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 MYCNOSP40205 109 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 EDDM3BP56851 147 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 RPL23AP62750 156 aaKnown RBP10.11□□□□□ -0.79
SCAF11-208ENST00000546534 TAGLNQ01995 201 aaKnown RBP10.11□□□□□ -0.79
SCAF11-208ENST00000546534 C9orf152Q5JTZ5 239 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 PLCXD3Q63HM9 321 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 CGB2Q6NT52 195 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 TCF23Q7RTU1 214 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 OR2W3Q7Z3T1 314 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 STMN2Q93045 179 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 PYURFQ96I23 114 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 P2RX4Q99571 388 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 NRIP2Q9BQI9 281 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 BTBD10Q9BSF8 475 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 SLC25A33Q9BSK2 321 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
SCAF11-208ENST00000546534 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 FAM183AA6NL82 134 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 J3QT63 122 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 NDUFAB1O14561 156 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 OR2F2O95006 317 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 LYNP07948 512 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 HAAOP46952 286 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 IL18R1Q13478 541 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 ZNF676Q8N7Q3 588 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 ASCC1Q8N9N2 400 aaKnown RBP10.1□□□□□ -0.79
SCAF11-208ENST00000546534 OR4P4Q8NGL7 312 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 THEM6Q8WUY1 208 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 ZNF714Q96N38 554 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 RBM14Q96PK6 669 aaKnown RBP10.1□□□□□ -0.79
SCAF11-208ENST00000546534 EFCAB1Q9HAE3 211 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 ARMC1Q9NVT9 282 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 ABCD2Q9UBJ2 740 aa10.1□□□□□ -0.79
SCAF11-208ENST00000546534 NUDT19A8MXV4 375 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 ZNF737O75373 536 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 SOX14O95416 240 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 GASTP01350 101 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 FABP3P05413 133 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 HTR1DP28221 377 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 BRS3P32247 399 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 RIPPLY1Q0D2K3 151 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 KCTD18Q6PI47 426 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-208ENST00000546534 HACD2Q6Y1H2 254 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 GDPD3Q7L5L3 318 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 TRPM8Q7Z2W7 1104 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 Q8NFD4 153 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 OTOSQ8NHW6 89 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 CLEC7AQ9BXN2 247 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 KRTAP17-1Q9BYP8 105 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 TMEM133Q9H2Q1 129 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 NIPAL2Q9H841 368 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 GORASP2Q9H8Y8 452 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 FGFR1OP2Q9NVK5 253 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 TAS2R1Q9NYW7 299 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 BAIAP2Q9UQB8 552 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 SLC22A13Q9Y226 551 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 KLHDC2Q9Y2U9 406 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 SESN1Q9Y6P5 492 aa10.09□□□□□ -0.79
SCAF11-208ENST00000546534 A0A0U1RQV5 110 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 RIIAD1A6NNX1 92 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 HMGB1P1B2RPK0 211 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 GMNNO75496 209 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 DNAJC8O75937 253 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 IFNGP01579 166 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 SNRNP70P08621 437 aaKnown RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 LYL1P12980 280 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 LUMP51884 338 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 PSME3P61289 254 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 ERVK11-1P61568 191 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 MEF2CQ06413 473 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 SAMD4BQ5PRF9 694 aaKnown RBP10.08□□□□□ -0.8
SCAF11-208ENST00000546534 COMMD2Q86X83 199 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 ZNF573Q86YE8 665 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 RNF148Q8N7C7 305 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 KLHL30-AS1Q8NEE0 82 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 OR2T33Q8NG76 320 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 MCUR1Q96AQ8 359 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 OTULINQ96BN8 352 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 CMC2Q9NRP2 79 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 HHLA2Q9UM44 414 aa10.08□□□□□ -0.8
SCAF11-208ENST00000546534 PIGLQ9Y2B2 252 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms