RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PDZK1IP1Q13113 114 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 ATXN7L3Q14CW9 347 aaPredicted RBP10.27□□□□□ -0.77
CCDC38-202ENST00000546386 ATPAF1Q5TC12 328 aaPredicted RBP10.27□□□□□ -0.77
CCDC38-202ENST00000546386 OR1J1Q8NGS3 322 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 GTF3AQ92664 365 aaKnown RBP10.27□□□□□ -0.77
CCDC38-202ENST00000546386 RDH5Q92781 318 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 SARAFQ96BY9 339 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 STARD4Q96DR4 205 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 MTCH1Q9NZJ7 389 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 EIF3KQ9UBQ5 218 aaKnown RBP10.27□□□□□ -0.77
CCDC38-202ENST00000546386 DUSP13Q9UII6 198 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF816-ZNF321PA0A0X1KG74 233 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 TMEM82A0PJX8 343 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 NAT2P11245 290 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 GLRA1P23415 457 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 FXYD4P59646 89 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 MALLQ13021 153 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 MAB21L1Q13394 359 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 SLC9A3R2Q15599 337 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 GLDNQ6ZMI3 551 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-202ENST00000546386 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 TMEM17Q86X19 198 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 SLC25A40Q8TBP6 338 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
CCDC38-202ENST00000546386 ASF1BQ9NVP2 202 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 AK3Q9UIJ7 227 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 RPL36A-HNRNPH2H7BZ11 118 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 HLA-AP01891 365 aaKnown RBP10.26□□□□□ -0.77
CCDC38-202ENST00000546386 CD37P11049 281 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 GABRA6Q16445 453 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 LAMTOR1Q6IAA8 161 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 Q6ZPA2 131 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 OR5T2Q8NGG2 359 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 TOMM40LQ969M1 308 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 RBMXL1Q96E39 390 aaKnown RBP10.26□□□□□ -0.77
CCDC38-202ENST00000546386 MARS2Q96GW9 593 aaKnown RBP10.26□□□□□ -0.77
CCDC38-202ENST00000546386 METTL9Q9H1A3 318 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 LIME1Q9H400 295 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 EHFQ9NZC4 300 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 KCNN3Q9UGI6 736 aa10.26□□□□□ -0.77
CCDC38-202ENST00000546386 C7orf66A4D0T2 115 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 OR14I1A6ND48 311 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 CDIPTO14735 213 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 CEACAM4O75871 244 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF35P13682 527 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 RAB6AP20340 208 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 FAUP35544 74 aaKnown RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 OR8B8Q15620 311 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 BEX5Q5H9J7 111 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 DNM1P46Q6ZS02 220 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 LRP11Q86VZ4 500 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 APOBEC3DQ96AK3 386 aaPredicted RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 IRF2BPLQ9H1B7 796 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 WDR13Q9H1Z4 485 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF442Q9H7R0 627 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 MKRN2OSH3BPM6 223 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 MFNGO00587 321 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 OR4E1P0C645 316 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 PGAM2P15259 253 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 OR3A3P47888 321 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 BTG1P62324 171 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 MRPS10P82664 201 aaKnown RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 PPP1R1AQ13522 171 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 DAZAP2Q15038 168 aaPredicted RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 TMEM53Q6P2H8 277 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF474Q6S9Z5 364 aaPredicted RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 COLCA1Q6ZS62 124 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 Q6ZT83 130 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 CCDC107Q8WV48 283 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 ST8SIA4Q92187 359 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 ESRP2Q9H6T0 727 aaKnown RBP10.25□□□□□ -0.77
CCDC38-202ENST00000546386 HIVEP3Q5T1R4 2406 aa10.25□□□□□ -0.77
CCDC38-202ENST00000546386 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 TEX46H3BTG2 121 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 AQP7O14520 342 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 CREBL2O60519 120 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 SS18L1O75177 396 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF14P17017 642 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 PRKACAP17612 351 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 NFYAP23511 347 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 CFPP27918 469 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 ARR3P36575 388 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 CNN3Q15417 329 aaKnown RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 MPPED2Q15777 294 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 RAB12Q6IQ22 244 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 FAM53AQ6NSI3 398 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 Q6ZS92 163 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 CDH24Q86UP0 819 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 ZCCHC24Q8N2G6 241 aaKnown RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 OSR2Q8N2R0 312 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 BOLLQ8N9W6 283 aaKnown RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF431Q8TF32 576 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-202ENST00000546386 S100PBPQ96BU1 408 aa10.24□□□□□ -0.77
CCDC38-202ENST00000546386 Q96M66 194 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms