RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 BEND2Q8NDZ0 799 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 C10orf35Q96D05 121 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 ZNF488Q96MN9 340 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 MYCBPQ99417 103 aaPredicted RBP7.66□□□□□ -1.18
YBX3-218ENST00000546298 TBX5Q99593 518 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 CITED1Q99966 193 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 GABARAPL3Q9BY60 117 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 SEMA6AQ9H2E6 1030 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 C16orf95Q9H693 158 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 ELL3Q9HB65 397 aaPredicted RBP7.66□□□□□ -1.18
YBX3-218ENST00000546298 IMPAD1Q9NX62 359 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 USE1Q9NZ43 259 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 OAZ3Q9UMX2 235 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 ORC6Q9Y5N6 252 aa7.66□□□□□ -1.18
YBX3-218ENST00000546298 FAM230AA0A1W2PPH8 454 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 SNTNA6NMZ2 147 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 TSPAN9O75954 239 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 CHRM2P08172 466 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 POLR2IP36954 125 aaKnown RBP7.65□□□□□ -1.18
YBX3-218ENST00000546298 FUT6P51993 359 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 LGALS4P56470 323 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 ERVFRD-1P60508 538 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 ERVK11-1P61568 191 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 ACTC1P68032 377 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 ACTA1P68133 377 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 PRB3Q04118 309 aaPredicted RBP7.65□□□□□ -1.18
YBX3-218ENST00000546298 CNN3Q15417 329 aaKnown RBP7.65□□□□□ -1.18
YBX3-218ENST00000546298 ODF4Q2M2E3 257 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 DOCK11Q5JSL3 2073 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 TMEM200BQ69YZ2 307 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 Q6ZSV7 163 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 KCTD20Q7Z5Y7 419 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 BORCS8Q96FH0 119 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 MRPL48Q96GC5 212 aaKnown RBP7.65□□□□□ -1.18
YBX3-218ENST00000546298 HES4Q9HCC6 221 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 RAB18Q9NP72 206 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 C19orf12Q9NSK7 152 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 OR14J1Q9UGF5 321 aa7.65□□□□□ -1.18
YBX3-218ENST00000546298 CUBNO60494 3623 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 A6NIN4 97 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 SAC3D1A6NKF1 404 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 H3BUX3 64 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 K7N7A8 449 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 CYB5AP00167 134 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 TK1P04183 234 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 UBCP0CG48 685 aaKnown RBP7.64□□□□□ -1.19
YBX3-218ENST00000546298 PRKACBP22694 351 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 ATP1B3P54709 279 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 DLX1P56177 255 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 PROK1P58294 105 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 SLC25A30Q5SVS4 291 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 TMEM244Q5VVB8 128 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 MEDAGQ5VYS4 303 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 HCP5Q6MZN7 132 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 ZFP1Q6P2D0 407 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 C11orf88Q6PI97 169 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 GDPD3Q7L5L3 318 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 SSX6Q7RTT6 188 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 ANGPTL5Q86XS5 388 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 EGFL6Q8IUX8 553 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 MKXQ8IYA7 352 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 Q8IYB0 196 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 ENTHD1Q8IYW4 607 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 PNKDQ8N490 385 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 ASCC1Q8N9N2 400 aaKnown RBP7.64□□□□□ -1.19
YBX3-218ENST00000546298 TRMT10AQ8TBZ6 339 aaKnown RBP7.64□□□□□ -1.19
YBX3-218ENST00000546298 PP6455Q8WZ26 134 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 RORBQ92753 470 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 EME1Q96AY2 570 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 CEP19Q96LK0 163 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 SSX3Q99909 188 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 PPA2Q9H2U2 334 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 SEBOXQ9HB31 216 aaPredicted RBP7.64□□□□□ -1.19
YBX3-218ENST00000546298 TCF7L1Q9HCS4 588 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 GNG8Q9UK08 70 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
YBX3-218ENST00000546298 LOC107986453A0A1B0GWG9 222 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 DAPL1A0PJW8 107 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 WIPF1O43516 503 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 APOL3O95236 402 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 RPSAP08865 295 aaKnown RBP7.63□□□□□ -1.19
YBX3-218ENST00000546298 OCM2P0CE71 109 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 OCMP0CE72 109 aaPredicted RBP7.63□□□□□ -1.19
YBX3-218ENST00000546298 ZNF20P17024 532 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 GABRA5P31644 462 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 CEBPDP49716 269 aaPredicted RBP7.63□□□□□ -1.19
YBX3-218ENST00000546298 COL10A1Q03692 680 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 ZNF85Q03923 595 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 SRSF4Q08170 494 aaKnown RBP7.63□□□□□ -1.19
YBX3-218ENST00000546298 UBE2V2Q15819 145 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 LRRC75BQ2VPJ9 315 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 TP53I3Q53FA7 332 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 SLC25A26Q70HW3 274 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 DNAAF1Q8NEP3 725 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 OR4M1Q8NGD0 313 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 OR4C13Q8NGP0 309 aa7.63□□□□□ -1.19
YBX3-218ENST00000546298 OR13D1Q8NGV5 346 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms