RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CKLFQ9UBR5 152 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 DNAJB11Q9UBS4 358 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 B4DSR2 109 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 MAGEB3O15480 346 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 GABRA5P31644 462 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 POU3F4P49335 361 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 TRAM1Q15629 374 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 ACP7Q6ZNF0 438 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 OR52N4Q8NGI2 321 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 SLAMF9Q96A28 289 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 TMIGD2Q96BF3 282 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 SNTG1Q9NSN8 517 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 NLKQ9UBE8 527 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 FOXJ3Q9UPW0 622 aa17.09■□□□□ 0.33
HMGA2-211ENST00000545998 INMTO95050 263 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 ZNF16P17020 682 aaPredicted RBP17.08■□□□□ 0.32
HMGA2-211ENST00000545998 PSMA1P25786 263 aaKnown RBP17.08■□□□□ 0.32
HMGA2-211ENST00000545998 BDKRB2P30411 391 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 GP2P55259 537 aaKnown RBP17.08■□□□□ 0.32
HMGA2-211ENST00000545998 ZP1P60852 638 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 SEC61A1P61619 476 aaKnown RBP17.08■□□□□ 0.32
HMGA2-211ENST00000545998 FAM27D1Q5T7N8 215 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 TMEM91Q6ZNR0 172 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 CEACAM19Q7Z692 300 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 MKXQ8IYA7 352 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 BATF2Q8N1L9 274 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 NEIL1Q96FI4 390 aaPredicted RBP17.08■□□□□ 0.32
HMGA2-211ENST00000545998 CEP19Q96LK0 163 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 NDUFB11Q9NX14 153 aa17.08■□□□□ 0.32
HMGA2-211ENST00000545998 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 F8VVB4 439 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 F8VWA3 439 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 SPRY1O43609 319 aaPredicted RBP17.07■□□□□ 0.32
HMGA2-211ENST00000545998 NXPH2O95156 264 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 PSMB9P28065 219 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 SMIM21Q3B7S5 101 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 TSPAN14Q8NG11 270 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 OR5T2Q8NGG2 359 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 OR8B3Q8NGG8 313 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 OR5D18Q8NGL1 313 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 ANGPTL6Q8NI99 470 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 CPNE2Q96FN4 548 aaPredicted RBP17.07■□□□□ 0.32
HMGA2-211ENST00000545998 OR8B2Q96RD0 313 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 PPIL3Q9H2H8 161 aaKnown RBP17.07■□□□□ 0.32
HMGA2-211ENST00000545998 KAAG1Q9UBP8 84 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 CTSZQ9UBR2 303 aa17.07■□□□□ 0.32
HMGA2-211ENST00000545998 IGKV1-12A0A0C4DH73 117 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 OR2AT4A6NND4 320 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ADAM20O43506 726 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 RGS9O75916 674 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-211ENST00000545998 CYB5AP00167 134 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 TGFAP01135 160 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 IGKV1D-12P01611 117 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 MSMBP08118 114 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 AMY2BP19961 511 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ZFP36P26651 326 aaKnown RBP17.06■□□□□ 0.32
HMGA2-211ENST00000545998 FABP5Q01469 135 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ATPAF1Q5TC12 328 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-211ENST00000545998 DDI2Q5TDH0 399 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ZNF841Q6ZN19 808 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 NLRC3Q7RTR2 1065 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 SATL1Q86VE3 508 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 LURAP1LQ8IV03 231 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 OR51F2Q8NH61 342 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 LPAR2Q9HBW0 351 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 IGKV1D-17A0A075B6S4 117 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 A0A087WXM4 84 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 CCRL2O00421 344 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 GABRPO00591 440 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 UCHL1P09936 223 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 PSG2P11465 335 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 NPBWR2P48146 333 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 PITPNBP48739 271 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ESCO2Q56NI9 601 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 SYT6Q5T7P8 510 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-211ENST00000545998 Q8IYB0 196 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 SAXO1Q8IYX7 474 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ZSCAN4Q8NAM6 433 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-211ENST00000545998 CCL13Q99616 98 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 DNTTIP1Q9H147 329 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 ZNF222Q9UK12 451 aa17.06■□□□□ 0.32
HMGA2-211ENST00000545998 A0A1B0GW55 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 KIAA1324LA8MWY0 1029 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 A8MXK9 166 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 TRAPPC2LH3BP13 241 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 ANGPTL7O43827 346 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L2P0CJ85 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L3P0CJ86 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L4P0CJ87 422 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L5P0CJ88 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L6P0CJ89 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L7P0CJ90 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 BCL3P20749 454 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 ZNF93P35789 620 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 LCN2P80188 198 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 NEDD8Q15843 81 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 FAM166AQ6J272 317 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4L9Q6RFH8 374 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 Q71RC1 249 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms