RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	H1FX	Q92522	213 aa	Known RBP	11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	PELI1	Q96FA3	418 aa		11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	METTL8	Q9H825	291 aa	Known RBP	11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	SEBOX	Q9HB31	216 aa	Predicted RBP	11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	RPL36	Q9Y3U8	105 aa	Known RBP	11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	POMT1	Q9Y6A1	747 aa		11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	NBEAL1	Q6ZS30	2694 aa		11.44	□□□□□ -0.58
VAMP1-208	ENST00000544432	MDFIC2	A0A1B0GVS7	189 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	FAM230A	A0A1W2PPH8	454 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	HOXA3	O43365	443 aa	Predicted RBP	11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	KNG1	P01042	644 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	IGHA1	P01876	353 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	HTR1A	P08908	422 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	NANOS3	P60323	173 aa	Known RBP	11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	MRPL28	Q13084	256 aa	Known RBP	11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	BLMH	Q13867	455 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	CNN3	Q15417	329 aa	Known RBP	11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	C3orf56	Q8N813	242 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	TMEM185A	Q8NFB2	350 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	TBC1D15	Q8TC07	691 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	HAVCR2	Q8TDQ0	301 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	SSMEM1	Q8WWF3	244 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	TNFRSF14	Q92956	283 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	STMN2	Q93045	179 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF488	Q96MN9	340 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF649	Q9BS31	505 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	FAM234A	Q9H0X4	552 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	C8orf4	Q9NR00	106 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	AASS	Q9UDR5	926 aa		11.43	□□□□□ -0.58
VAMP1-208	ENST00000544432	IGKV1-27	A0A075B6S5	117 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	OR4C45	A6NMZ5	311 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432		J3QLW9	94 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	SLC1A7	O00341	560 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	MELTF	P08582	738 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF19	P17023	458 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	PRKACB	P22694	351 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	ALKBH1	Q13686	389 aa	Known RBP	11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	KLHL22	Q53GT1	634 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	NCR3LG1	Q68D85	454 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	LHFPL3	Q86UP9	236 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	LDLRAD3	Q86YD5	345 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	PIP4P2	Q8N4L2	257 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF555	Q8NEP9	628 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	ADAT3	Q96EY9	351 aa	Predicted RBP	11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	BORCS8	Q96FH0	119 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	C4orf36	Q96KX1	117 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	CEP19	Q96LK0	163 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	ALG8	Q9BVK2	526 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	JAM3	Q9BX67	310 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	SMPD3	Q9NY59	655 aa	Predicted RBP	11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	MTCH1	Q9NZJ7	389 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	HHLA2	Q9UM44	414 aa		11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	CAB39	Q9Y376	341 aa	Predicted RBP	11.42	□□□□□ -0.58
VAMP1-208	ENST00000544432	IGKV1-9	A0A0C4DH69	117 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		A0A0U1RQK1	487 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		A0A1W2PPH5	198 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		A0A1W2PQ09	198 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	POM121C	A8CG34	1229 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	RNASEK-C17orf49	H0YIS7	233 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		H3BSH0	61 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	MT-ND2	P03891	347 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	CHRM2	P08172	466 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	ATF1	P18846	271 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	EEF1B2	P24534	225 aa	Known RBP	11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	RBP2	P50120	134 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	UBE2E1	P51965	193 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	CAPZA1	P52907	286 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	ATP1B3	P54709	279 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	RPL15	P61313	204 aa	Known RBP	11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	RPL31	P62899	125 aa	Known RBP	11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	MKX	Q8IYA7	352 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		Q8IYB0	196 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	PACRGL	Q8N7B6	248 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	OR5D13	Q8NGL4	314 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	APH1B	Q8WW43	257 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	SPSB1	Q96BD6	273 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	FGGY	Q96C11	551 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF747	Q9BV97	191 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	AMBN	Q9NP70	447 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	FGF20	Q9NP95	211 aa	Predicted RBP	11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	SIRT7	Q9NRC8	400 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	ERVK13-1	Q9NX77	482 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432	MYRF	Q9Y2G1	1151 aa		11.41	□□□□□ -0.58
VAMP1-208	ENST00000544432		K7N7A8	449 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	NPFF	O15130	113 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	WBP4	O75554	376 aa	Known RBP	11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	ALX3	O95076	343 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	TK1	P04183	234 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF20	P17024	532 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	ACSM1	Q08AH1	577 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	TTC23	Q5W5X9	447 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	LHFPL2	Q6ZUX7	228 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	SLC25A26	Q70HW3	274 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	ZNF676	Q8N7Q3	588 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	OR52I1	Q8NGK6	324 aa		11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	ELL3	Q9HB65	397 aa	Predicted RBP	11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	SF3B6	Q9Y3B4	125 aa	Known RBP	11.4	□□□□□ -0.58
VAMP1-208	ENST00000544432	FAM96B	Q9Y3D0	163 aa		11.4	□□□□□ -0.58

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