RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 DUX4L5P0CJ88 424 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 DUX4L6P0CJ89 424 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 DUX4L7P0CJ90 424 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 PTGER4P35408 488 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 ECI1P42126 302 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 CLDN18P56856 261 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 UNQ6126/PRO20091Q6UXV3 157 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 SULT4A1Q9BR01 284 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 LINC00470Q9BZP3 86 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 SLC7A10Q9NS82 523 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 DUX4Q9UBX2 424 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 SLC7A11Q9UPY5 501 aa15.62■□□□□ 0.09
VIM-209ENST00000544301 ZNF587BE7ETH6 402 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 M0R296 226 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 XRCC2O43543 280 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 LYL1P12980 280 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 RRADP55042 308 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 ARF1P84077 181 aaKnown RBP15.61■□□□□ 0.09
VIM-209ENST00000544301 PDZK1IP1Q13113 114 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 SNTB1Q13884 538 aaKnown RBP15.61■□□□□ 0.09
VIM-209ENST00000544301 OR1C1Q15619 314 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PIGYQ3MUY2 71 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 TMEM164Q5U3C3 297 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PLCXD3Q63HM9 321 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 OSR2Q8N2R0 312 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 BHLHE23Q8NDY6 225 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PIGCQ92535 297 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 SPSB4Q96A44 273 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PIK3IP1Q96FE7 263 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 C2orf50Q96LR7 162 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 CMSS1Q9BQ75 279 aaKnown RBP15.61■□□□□ 0.09
VIM-209ENST00000544301 PRDM14Q9GZV8 571 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 IL36GQ9NZH8 169 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 COQ3Q9NZJ6 369 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 ZNF816-ZNF321PA0A0X1KG74 233 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 FAM166BA8MTA8 275 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 F8VVB4 439 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 F8VWA3 439 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 GEMIN2O14893 280 aaKnown RBP15.61■□□□□ 0.09
VIM-209ENST00000544301 DTYMKP23919 212 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PAN3Q58A45 887 aaKnown RBP15.61■□□□□ 0.09
VIM-209ENST00000544301 DCAF10Q5QP82 559 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PRSS54Q6PEW0 395 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 POC1AQ8NBT0 407 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 NAXEQ8NCW5 288 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 PLA2G3Q9NZ20 509 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 ABI3Q9P2A4 366 aa15.61■□□□□ 0.09
VIM-209ENST00000544301 GPR179Q6PRD1 2367 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 IFNA2P01563 188 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 FCGR3AP08637 254 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 HOXD4P09016 255 aaPredicted RBP15.6■□□□□ 0.09
VIM-209ENST00000544301 OR5H8P0DN80 308 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 ITGA3P26006 1051 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 OPRM1P35372 400 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 MAGEA5P43359 124 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 PPIAP62937 165 aaKnown RBP15.6■□□□□ 0.09
VIM-209ENST00000544301 PLEKHN1Q494U1 663 aaPredicted RBP15.6■□□□□ 0.09
VIM-209ENST00000544301 PLA2G2CQ5R387 149 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 FBXL14Q8N1E6 418 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 OR10AD1Q8NGE0 317 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 STOML3Q8TAV4 291 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 ADAMTS17Q8TE56 1095 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 MRPS24Q96EL2 167 aaKnown RBP15.6■□□□□ 0.09
VIM-209ENST00000544301 TTTY12Q9BZ98 90 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 DNTTIP1Q9H147 329 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 SLC6A15Q9H2J7 730 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 BCO1Q9HAY6 547 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 DECR2Q9NUI1 292 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 OR5AC2Q9NZP5 309 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 SPEF1Q9Y4P9 236 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 AHCTF1Q8WYP5 2266 aa15.6■□□□□ 0.09
VIM-209ENST00000544301 CDX4O14627 284 aaPredicted RBP15.59■□□□□ 0.09
VIM-209ENST00000544301 CTSDP07339 412 aaPredicted RBP15.59■□□□□ 0.09
VIM-209ENST00000544301 SFTPBP07988 381 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 HOXB5P09067 269 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 ZNF708P17019 499 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 IL15RAQ13261 267 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 BRICD5Q6PL45 260 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 COLCA1Q6ZS62 124 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 GLRX5Q86SX6 157 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 TUSC5Q8IXB3 177 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 SLC38A6Q8IZM9 456 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 STPG2Q8N412 459 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.59■□□□□ 0.09
VIM-209ENST00000544301 DYRK2Q92630 601 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 TECTBQ96PL2 329 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 FAM117AQ9C073 453 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 SHARPINQ9H0F6 387 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 LIME1Q9H400 295 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 PARPBPQ9NWS1 579 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 ATPIF1Q9UII2 106 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 SYNGR4O95473 234 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 MT-CO3P00414 261 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 C9orf135Q5VTT2 229 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 LINC00696Q6ZRV3 163 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 OR51F2Q8NH61 342 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 CALHM2Q9HA72 323 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 NECAP2Q9NVZ3 263 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 ST3GAL6Q9Y274 331 aa15.59■□□□□ 0.09
VIM-209ENST00000544301 A0A096LPE4 126 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms