RNA–Protein interactions for RNA: ENST00000544244.5

PTPRO-210, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 3,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-210ENST00000544244 SNX29P2Q8IUI4 249 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 FAM58AQ8N1B3 248 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 DYNC2LI1Q8TCX1 351 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.63
PTPRO-210ENST00000544244 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 MYOZ1Q9NP98 299 aaPredicted RBP4.84□□□□□ -1.63
PTPRO-210ENST00000544244 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 RTTNQ86VV8 2226 aa4.84□□□□□ -1.63
PTPRO-210ENST00000544244 PPIHO43447 177 aaKnown RBP4.84□□□□□ -1.64
PTPRO-210ENST00000544244 HPGDSO60760 199 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 PLAUP00749 431 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 GSTT2BP0CG30 244 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 DNASE1P24855 282 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 BLVRBP30043 206 aaPredicted RBP4.84□□□□□ -1.64
PTPRO-210ENST00000544244 MADCAM1Q13477 382 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 MICBQ29980 383 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 LRRTM1Q86UE6 522 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 LRP11Q86VZ4 500 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 LRRC28Q86X40 367 aaPredicted RBP4.84□□□□□ -1.64
PTPRO-210ENST00000544244 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.64
PTPRO-210ENST00000544244 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 RPS4Y2Q8TD47 263 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 ZNF75AQ96N20 296 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 KCNIP1Q9NZI2 227 aa4.84□□□□□ -1.64
PTPRO-210ENST00000544244 TRAV38-1A0A0B4J264 116 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 PAHP00439 452 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 MGMTP16455 207 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 VEGFCP49767 419 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 AP3S2P59780 193 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RNASE12Q5GAN4 147 aaKnown RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 C1orf100Q5SVJ3 147 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 OVCH2Q7RTZ1 564 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 IZUMO1Q8IYV9 350 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 SAXO1Q8IYX7 474 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 BATF2Q8N1L9 274 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 ACBD4Q8NC06 268 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 PXT1Q8NFP0 134 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RDH5Q92781 318 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 NEUROG1Q92886 237 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RAB3CQ96E17 227 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 WNT10AQ9GZT5 417 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RAB9BQ9NP90 201 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 ST3GAL6Q9Y274 331 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 LINC00854A0A1B0GVQ3 168 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 SHISA9B4DS77 424 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 CTDSP2O14595 271 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 IFNA6P05013 189 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 PRSS3P35030 304 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 FAUP35544 74 aaKnown RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 OR3A3P47888 321 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 ZNF45Q02386 682 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 EFNB3Q15768 340 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 PAN3Q58A45 887 aaKnown RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 PYHIN1Q6K0P9 492 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 CNIH2Q6PI25 160 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 Q6ZTK2 550 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 SCCPDHQ8NBX0 429 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 UBASH3BQ8TF42 649 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 FCAMRQ8WWV6 532 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 IGHV1-69-2A0A0G2JMI3 117 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 ZSCAN5BA6NJL1 495 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 DEFB108AA8MXU0 73 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 H7C1Q1 480 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 AKR7A2O43488 359 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 IGFBP3P17936 291 aaPredicted RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RAB6AP20340 208 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 CD200P41217 278 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 C8orf86Q6ZUL3 223 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 SLC36A1Q7Z2H8 476 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 OR10Z1Q8NGY1 313 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 DACT3Q96B18 629 aaPredicted RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 COX4I2Q96KJ9 171 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 CMTM3Q96MX0 182 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 RBM38Q9H0Z9 239 aaKnown RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 NPTNQ9Y639 398 aa4.83□□□□□ -1.64
PTPRO-210ENST00000544244 HEATR1Q9H583 2144 aaKnown RBP4.83□□□□□ -1.64
PTPRO-210ENST00000544244 SHANK1Q9Y566 2161 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 PPIAL4EA0A075B759 164 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 A0A0A6YYH2 397 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 PQLC2LA1A4F0 135 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 A6NJ64 397 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 H0YL77 283 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 RBBP9O75884 186 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 IGHV1-46P01743 117 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 PPIAL4FP0DN26 164 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 ATP5J2P56134 94 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 MRPS10P82664 201 aaKnown RBP4.82□□□□□ -1.64
PTPRO-210ENST00000544244 IL24Q13007 206 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 TAF9Q16594 264 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 TMEM42Q69YG0 159 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 OR10K2Q6IF99 312 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 CLEC2AQ6UVW9 174 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 DTX3Q8N9I9 347 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 OR6Q1Q8NGQ2 317 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 BARHL1Q9BZE3 327 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 RHOFQ9HBH0 211 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 RASL12Q9NYN1 266 aa4.82□□□□□ -1.64
PTPRO-210ENST00000544244 PLEKHB1Q9UF11 243 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms