RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 BCL3P20749 454 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 MVDP53602 400 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
CHD4-210ENST00000544040 NTNG2Q96CW9 530 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 GPR87Q9BY21 358 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.79□□□□□ -0.2
CHD4-210ENST00000544040 M0R143 59 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 CBR3O75828 277 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 SELENOPP49908 381 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 OR1L6Q8NGR2 347 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 RPEQ96AT9 228 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 TOX2Q96NM4 488 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 DSCR4P56555 118 aaPredicted RBP13.79□□□□□ -0.2
CHD4-210ENST00000544040 HLA-DRB3P79483 266 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 HDGFL3Q9Y3E1 203 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 CTAG2O75638 210 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 CACFD1Q9UGQ2 172 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 A0A1W2PRD5 423 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 A0A1W2PRF3 423 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 A0A1W2PRM7 423 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 HPXP02790 462 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 OR11G2Q8NGC1 345 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 OR4C3Q8NH37 302 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 MMP17Q9ULZ9 603 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
CHD4-210ENST00000544040 FGF2P09038 288 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 CD1BP29016 333 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 PPM1DO15297 605 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 PTGFRP43088 359 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 CD300CQ08708 224 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 MICBQ29980 383 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 MRM1Q6IN84 353 aaKnown RBP13.78□□□□□ -0.2
CHD4-210ENST00000544040 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 ZNF788Q6ZQV5 615 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 SLC26A10Q8NG04 563 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 OR6S1Q8NH40 331 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 PP6455Q8WZ26 134 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 METTL12A8MUP2 240 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 FAM157AC9JC47 383 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 MS4A18H0YCH9 400 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 EDIL3O43854 480 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 CCL7P80098 99 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 MS4A18Q3C1V0 323 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 AWAT1Q58HT5 328 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 B3GNTL1Q67FW5 361 aaPredicted RBP13.78□□□□□ -0.2
CHD4-210ENST00000544040 SNX22Q96L94 193 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 DOK1Q99704 481 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 NAA60Q9H7X0 242 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 AP4M1O00189 453 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 CBLN2Q8IUK8 224 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 ZNF383Q8NA42 475 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 FLYWCH2Q96CP2 140 aaKnown RBP13.78□□□□□ -0.2
CHD4-210ENST00000544040 RAB40CQ96S21 281 aa13.78□□□□□ -0.2
CHD4-210ENST00000544040 HRASP01112 189 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 DPPA3Q6W0C5 159 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 C5orf17Q8NAS9 161 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 MRGPRDQ8TDS7 321 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 AKIRIN1Q9H9L7 192 aaPredicted RBP13.77□□□□□ -0.2
CHD4-210ENST00000544040 LPAR3Q9UBY5 353 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 RBFOX3A6NFN3 312 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 RHBDL1O75783 438 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 PGA3P0DJD8 388 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 GNG3P63215 75 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 LYRM7Q5U5X0 104 aa13.77□□□□□ -0.2
CHD4-210ENST00000544040 PACRGQ96M98 296 aaPredicted RBP13.77□□□□□ -0.2
CHD4-210ENST00000544040 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.2
CHD4-210ENST00000544040 ACAA1P09110 424 aaPredicted RBP13.77□□□□□ -0.21
CHD4-210ENST00000544040 CRISP2P16562 243 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 ZNF25P17030 456 aaPredicted RBP13.77□□□□□ -0.21
CHD4-210ENST00000544040 C19orf57Q0VDD7 668 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 ZNF141Q15928 474 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 XAF1Q6GPH4 301 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 ZNF880Q6PDB4 577 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 GFRALQ6UXV0 394 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 OR2C3Q8N628 320 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
CHD4-210ENST00000544040 DUXBA0A1W2PPF3 345 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 GEMIN2O14893 280 aaKnown RBP13.77□□□□□ -0.21
CHD4-210ENST00000544040 DNPH1O43598 174 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 ELOBQ15370 118 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 FAM219AQ8IW50 185 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 CCL17Q92583 94 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 EPPINO95925 133 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 POLR2GP62487 172 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHD4-210ENST00000544040 ZNF117Q03924 483 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 HLA-DRB5Q30154 266 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 OR4D10Q8NGI6 311 aa13.77□□□□□ -0.21
CHD4-210ENST00000544040 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 RGP1Q92546 391 aaPredicted RBP13.76□□□□□ -0.21
CHD4-210ENST00000544040 CNTD2Q9H8S5 307 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 TREM2Q9NZC2 230 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 IL36GQ9NZH8 169 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 GNRHR2Q96P88 292 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 SEC11CQ9BY50 192 aa13.76□□□□□ -0.21
CHD4-210ENST00000544040 ADAP1O75689 374 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms