RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 HOXA1P49639 335 aaPredicted RBP13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 RBP2P50120 134 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 CHRFAM7AQ494W8 412 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 ZNF100Q8IYN0 542 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 ADAMTS17Q8TE56 1095 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 ZNF701Q9NV72 531 aaPredicted RBP13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 PRR13Q9NZ81 148 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 SHPKQ9UHJ6 478 aa13.97□□□□□ -0.17
SCNN1A-221ENST00000543768 KANTRA0A1W2PQU2 76 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 PSMB6P28072 239 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 CLDN18P56856 261 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 SRYQ05066 204 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 RSU1Q15404 277 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 TAF9Q16594 264 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 ANKRD55Q3KP44 614 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 NKAPLQ5M9Q1 402 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 NSUN5P2Q63ZY6 315 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 LHFPL2Q6ZUX7 228 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 RELL2Q8NC24 303 aaPredicted RBP13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 BORCS8Q96FH0 119 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 RGCCQ9H4X1 137 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 MED13Q9UHV7 2174 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 NOSIPQ9Y314 301 aaKnown RBP13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 KMT2EQ8IZD2 1858 aa13.96□□□□□ -0.17
SCNN1A-221ENST00000543768 ADAP1O75689 374 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 CSTBP04080 98 aaKnown RBP13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 EDN3P14138 238 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 PABPC1L2AQ5JQF8 200 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 DCAF10Q5QP82 559 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 TMEM164Q5U3C3 297 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 CPEB3Q8NE35 698 aaKnown RBP13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 CPNE2Q96FN4 548 aaPredicted RBP13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 LOXL4Q96JB6 756 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 FAAP24Q9BTP7 215 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 RNF126Q9BV68 326 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 SLC7A10Q9NS82 523 aa13.96□□□□□ -0.18
SCNN1A-221ENST00000543768 KNTC1P50748 2209 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 IGKV1-12A0A0C4DH73 117 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 ZNF587BE7ETH6 402 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 MRPL33O75394 65 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 IGKV1D-12P01611 117 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 LUMP51884 338 aaPredicted RBP13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 S100A12P80511 92 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 OR1C1Q15619 314 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 OR8B8Q15620 311 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 NRN1LQ496H8 165 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 LURAP1LQ8IV03 231 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 ZNF75AQ96N20 296 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 MICU1Q9BPX6 476 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 SLC25A32Q9H2D1 315 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 RAB18Q9NP72 206 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 PLA2G3Q9NZ20 509 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 HSF4Q9ULV5 492 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 FAM74A7A6NL05 159 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 RRP8O43159 456 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 KCNAB3O43448 404 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 MT-CO3P00414 261 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 MAGEA5P43359 124 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 CYCSP99999 105 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 FAM74A3Q4VXF1 159 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 LRRC46Q96FV0 321 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 C1QTNF5Q9BXJ0 243 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 TTTY12Q9BZ98 90 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 LINC00470Q9BZP3 86 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 CSAG2Q9Y5P2 127 aa13.95□□□□□ -0.18
SCNN1A-221ENST00000543768 H0YIZ8 118 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 FARS2O95363 451 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 SURF2Q15527 256 aaPredicted RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 INO80EQ8NBZ0 244 aaPredicted RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 SPSB4Q96A44 273 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 ZNF471Q9BX82 626 aaPredicted RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 PURGQ9UJV8 347 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 CELSR3Q9NYQ7 3312 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 FAM166BA8MTA8 275 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 ZNF708P17019 499 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 ITGA3P26006 1051 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 CHATP28329 748 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 RPL35P42766 123 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 FAM74A1Q5RGS3 127 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 TUSC5Q8IXB3 177 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 C12orf57Q99622 126 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 PRDM14Q9GZV8 571 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 IL17BQ9UHF5 180 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 ANXA10Q9UJ72 324 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 NCOR1O75376 2440 aa13.94□□□□□ -0.18
SCNN1A-221ENST00000543768 AKR1D1P51857 326 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 FUT6P51993 359 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 ARF1P84077 181 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 PDZK1IP1Q13113 114 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 LINC00696Q6ZRV3 163 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 COLCA1Q6ZS62 124 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 PIGCQ92535 297 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 SULT4A1Q9BR01 284 aa13.93□□□□□ -0.18
SCNN1A-221ENST00000543768 EDARQ9UNE0 448 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms