RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZNF16P17020 682 aaPredicted RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 PRKACAP17612 351 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 IGFBP3P17936 291 aaPredicted RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 SRMP19623 302 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FSTP19883 344 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 BCL3P20749 454 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MPZP25189 248 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 IL2RGP31785 369 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 CFHR2P36980 270 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PITPNBP48739 271 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 LCN2P80188 198 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FABP5Q01469 135 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 SCN1BQ07699 218 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PDZK1IP1Q13113 114 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 IKZF1Q13422 519 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 SSX1Q16384 188 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 TMEM249Q2WGJ8 235 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FAM27D1Q5T7N8 215 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 TEX36Q5VZQ5 186 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 GLT8D1Q68CQ7 371 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 AWAT2Q6E213 333 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 C22orf42Q6IC83 251 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 LYPD2Q6UXB3 125 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 CLEC9AQ6UXN8 241 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 UNQ9370/PRO34162Q6UXP9 181 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 ACP7Q6ZNF0 438 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 SLC36A1Q7Z2H8 476 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FAM58AQ8N1B3 248 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 NKAIN3Q8N8D7 197 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 ST8SIA4Q92187 359 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PHYHIPQ92561 330 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MUL1Q969V5 352 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 FOXRED1Q96CU9 486 aaPredicted RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 SEH1LQ96EE3 360 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MED30Q96HR3 178 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 CCL13Q99616 98 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 NKX3-1Q99801 234 aaPredicted RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 TMUB1Q9BVT8 246 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MRPS26Q9BYN8 205 aaKnown RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 METTL9Q9H1A3 318 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PATZ1Q9HBE1 687 aaKnown RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 PLGRKTQ9HBL7 147 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 YAE1D1Q9NRH1 226 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PCDHB16Q9NRJ7 776 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MTCH1Q9NZJ7 389 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 CLN8Q9UBY8 286 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 OR5V1Q9UGF6 321 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 STUB1Q9UNE7 303 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 TEX15Q9BXT5 2789 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 PRRC2AP48634 2157 aaKnown RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 CSMD1Q96PZ7 3565 aa5.29□□□□□ -1.56
LTBR-212ENST00000543542 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
LTBR-212ENST00000543542 SPG11Q96JI7 2443 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 CR1P17927 2039 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 TRDV1A0A1B0GX56 115 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 RFPL4AA6NLU0 287 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 B4DSR2 109 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 FAM157AC9JC47 383 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 RFPL4AL1F8VTS6 287 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 SH2D1BO14796 132 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 PIN1P1O15428 100 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 NOS1APO75052 506 aaPredicted RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 FOXH1O75593 365 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 GPX5O75715 221 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 CDRT1O95170 752 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 TFF1P04155 84 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 UCHL1P09936 223 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 IGHV4-31P0DP07 118 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 PSG2P11465 335 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 NDUFB7P17568 137 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 SERPINA2P20848 420 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 PTGFRP43088 359 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 OR3A4PP47883 348 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 NPBWR2P48146 333 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 NPY4RP50391 375 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 BMXP51813 675 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 GP2P55259 537 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 LMO4P61968 165 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 IL13RA1P78552 427 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 TIMM50Q3ZCQ8 353 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 LRRC10Q5BKY1 277 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 SYT6Q5T7P8 510 aaPredicted RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 FAM166AQ6J272 317 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 GLIPR1L1Q6UWM5 242 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 TMEM91Q6ZNR0 172 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 RNF144BQ7Z419 303 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 BIVMQ86UB2 503 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 GLCCI1Q86VQ1 547 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 SAXO1Q8IYX7 474 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 ASCC1Q8N9N2 400 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 ZSCAN4Q8NAM6 433 aaPredicted RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 TMEM185AQ8NFB2 350 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 OR10K1Q8NGX5 313 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 H1FXQ92522 213 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 C12orf43Q96C57 262 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 SMR3AQ99954 134 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 NRIP2Q9BQI9 281 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms