RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ETV1P50549 477 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 ARF6P62330 175 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 LAIR2Q6ISS4 152 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 ZNF676Q8N7Q3 588 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 SIGLECL1Q8N7X8 197 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 ZNRF1Q8ND25 227 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 NPRL2Q8WTW4 380 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 FBLIM1Q8WUP2 373 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 MS4A7Q9GZW8 240 aaPredicted RBP12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 SLC25A10Q9UBX3 287 aaPredicted RBP12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 SOX21Q9Y651 276 aaPredicted RBP12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 KPTNQ9Y664 436 aa12.74□□□□□ -0.37
ECHDC2-223ENST00000542552 CENPVL3A0A0U1RRI6 287 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 RFPL4AA6NLU0 287 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 TMEM212A6NML5 194 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 RFPL4AL1F8VTS6 287 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 NXPH2O95156 264 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 MT-ND2P03891 347 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 ATF1P18846 271 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 PRDX2P32119 198 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 GABRA2P47869 451 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 GBX2P52951 348 aaPredicted RBP12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 PDCD1Q15116 288 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 METTL11BQ5VVY1 283 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 KIR3DL3Q8N743 410 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 FAM216AQ8WUB2 273 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 BORCS8Q96FH0 119 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 DIMT1Q9UNQ2 313 aaKnown RBP12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 CAB39Q9Y376 341 aaPredicted RBP12.73□□□□□ -0.37
ECHDC2-223ENST00000542552 F8VVB4 439 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 F8VWA3 439 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 KNG1P01042 644 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 CCDC159P0C7I6 412 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 ZNF20P17024 532 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 PRKACBP22694 351 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 AZGP1P25311 298 aaKnown RBP12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 RBP2P50120 134 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 BRD3OSQ6XYD6 125 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 ZNF561Q8N587 486 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 Q8N7P7 452 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 OR5AK2Q8NH90 309 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 TFAP2CQ92754 450 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 GGHQ92820 318 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 SPSB1Q96BD6 273 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 C1orf147Q96MC9 270 aaPredicted RBP12.72□□□□□ -0.37
ECHDC2-223ENST00000542552 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 ALX3O95076 343 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 PIPP12273 146 aaPredicted RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 NDUFB7P17568 137 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 ATP1B3P54709 279 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 UBA52P62987 128 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 XAF1Q6GPH4 301 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 RPL22L1Q6P5R6 122 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 CRIP3Q6Q6R5 217 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 RBMS3Q6XE24 437 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 TMPRSS11AQ6ZMR5 421 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 SLC25A26Q70HW3 274 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 C8orf59Q8N0T1 100 aaPredicted RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 BATF2Q8N1L9 274 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 PARP16Q8N5Y8 322 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 SLAMF9Q96A28 289 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 TMEM80Q96HE8 168 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 PDCD1LG2Q9BQ51 273 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 SEBOXQ9HB31 216 aaPredicted RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 PLCXD1Q9NUJ7 323 aa12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 EXOSC1Q9Y3B2 195 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-223ENST00000542552 TRBV23-1A0A0A0MS06 115 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CLDN34H7C241 214 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 SLC1A7O00341 560 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 OGG1O15527 345 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 PRTN3P24158 256 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 MTCP1P56278 107 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CDK5R1Q15078 307 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 RNF144BQ7Z419 303 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms