RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 C1QCP02747 245 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 REG1AP05451 166 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 CFC1P0CG37 223 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF728P0DKX0 622 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PNMTP11086 282 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 HTN3P15516 51 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF32P17041 273 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 AZU1P20160 251 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 NMBRP28336 390 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 GABRA2P47869 451 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF84P51523 738 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 CIRBPQ14011 172 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PTGES3Q15185 160 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 RPEL1Q2QD12 228 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM30BQ3MIR4 351 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF57Q68EA5 555 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PYHIN1Q6K0P9 492 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 MORN3Q6PF18 240 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 RBM43Q6ZSC3 357 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF621Q6ZSS3 439 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 FRA10AC1Q70Z53 315 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 MYLK4Q86YV6 388 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PCYOX1LQ8NBM8 494 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 POC1AQ8NBT0 407 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ADAD2Q8NCV1 583 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNRF1Q8ND25 227 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR4P4Q8NGL7 312 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR1L6Q8NGR2 347 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR2T27Q8NH04 317 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR5B3Q8NH48 314 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 MFSD8Q8NHS3 518 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 LRRC29Q8WV35 223 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 SGTBQ96EQ0 304 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 CHMP6Q96FZ7 201 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 NAP1L5Q96NT1 182 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 GAFA1Q96PS6 74 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 RAB40CQ96S21 281 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ERP44Q9BS26 406 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 IQCGQ9H095 443 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 C1orf21Q9H246 121 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 CAB39LQ9H9S4 337 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 SIAEQ9HAT2 523 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 SMURF2Q9HAU4 748 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 SPAG4Q9NPE6 437 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 HEYLQ9NQ87 328 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 FBXO6Q9NRD1 293 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 SNTG1Q9NSN8 517 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 GLTPQ9NZD2 209 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 HSF4Q9ULV5 492 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 NFU1Q9UMS0 254 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 AP3M1Q9Y2T2 418 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 UBE2J1Q9Y385 318 aaPredicted RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OARD1Q9Y530 152 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 TIMM10BQ9Y5J6 103 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGHV3OR16-8A0A075B7F1 116 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRAV25A0A0B4J276 109 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 C13orf42A0A1B0GVH6 325 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 NCF1BA6NI72 391 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 NCF1CA8MVU1 366 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 E7EVH7 732 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 NPIPB9F8W1W9 429 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 H0YIV9 168 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PLPP3O14495 311 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 BHLHE40O14503 412 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 DYNC1I1O14576 645 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR7A17O14581 309 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TOR1AO14656 332 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 AIM2O14862 343 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 AHSA1O95433 338 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGKV1D-33P01593 117 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGKV1-33P01594 117 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGLV2-23P01705 113 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 HLA-DQA2P01906 255 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 LCATP04180 440 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 CRYGCP07315 174 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IFI6P09912 130 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 CGB3P0DN86 165 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 KITP10721 976 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 FOLR2P14207 255 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 NCF1P14598 390 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 UQCRBP14927 111 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 CA6P23280 308 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 MDH1P40925 334 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 MAP2K4P45985 399 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PRRX1P54821 245 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 DLX6P56179 175 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PCBD1P61457 104 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 RPS27AP62979 156 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 MEF2CQ06413 473 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF273Q14593 569 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 INSL4Q14641 139 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 FCN2Q15485 313 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 GSTA3Q16772 222 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TPTE2P1Q5T6R2 138 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 C1orf140Q5VVS0 124 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 LIPJQ5W064 366 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SULT1C3Q6IMI6 304 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 C1orf94Q6P1W5 598 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR93Q6P2C0 686 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR73Q6P4I2 378 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms