RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 IGHV3-64DA0A0J9YX35 117 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 CALRP27797 417 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 PTGFRP43088 359 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 POU3F4P49335 361 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 GZMKP49863 264 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 GP2P55259 537 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 FABP5Q01469 135 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 SPIN3Q5JUX0 258 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 ATPAF1Q5TC12 328 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 ZNF826PQ6ZT77 177 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 CALHM1Q8IU99 346 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 MRPS24Q96EL2 167 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 C18orf12Q96KH6 178 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 KCTD7Q96MP8 289 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 FGF23Q9GZV9 251 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 METTL9Q9H1A3 318 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 TMEM165Q9HC07 324 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 SMURF1Q9HCE7 757 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 TREM2Q9NZC2 230 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 NLKQ9UBE8 527 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 KAAG1Q9UBP8 84 aa14.7□□□□□ -0.06
CLSTN3-210ENST00000540931 NKX6-3A6NJ46 265 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 PIN1P1O15428 100 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 AKR7A2O43488 359 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 KDM4BO94953 1096 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 KNG1P01042 644 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 MAS1P04201 325 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 MTNR1BP49286 362 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 ERVK11-1P61568 191 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 ZMYND11Q15326 602 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 FAM189A2Q15884 450 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 ELP2Q6IA86 826 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 ANGPTL5Q86XS5 388 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 JAGN1Q8N5M9 183 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 OR8B3Q8NGG8 313 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 OR52N4Q8NGI2 321 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 TNFAIP8L1Q8WVP5 186 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 OR8B2Q96RD0 313 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 PATZ1Q9HBE1 687 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 HES4Q9HCC6 221 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 EXOSC4Q9NPD3 245 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 IL36GQ9NZH8 169 aa14.69□□□□□ -0.06
CLSTN3-210ENST00000540931 FLNAP21333 2647 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 IGKV1-27A0A075B6S5 117 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 TRAV8-7A0A075B6U6 113 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 A0A1W2PPK0 400 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 RNF223E7ERA6 249 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 CSTBP04080 98 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 RPL5P46777 297 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 RSU1Q15404 277 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 ASCL4Q6XD76 172 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 ACP7Q6ZNF0 438 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 LINC00596Q86U02 117 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 CROCCP3Q8IVE0 287 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 BOLLQ8N9W6 283 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 OR51A2Q8NGJ7 313 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 NEIL1Q96FI4 390 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 COX4I2Q96KJ9 171 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 DMRTB1Q96MA1 342 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 TMEM246Q9BRR3 403 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 ZNF665Q9H7R5 613 aa14.68□□□□□ -0.06
CLSTN3-210ENST00000540931 OR2AT4A6NND4 320 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 B4DSR2 109 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 SYNGR1O43759 233 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 FOXH1O75593 365 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 RHBDL1O75783 438 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 CD37P11049 281 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 RPS2P15880 293 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 ZP1P60852 638 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 ESCO2Q56NI9 601 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 AVPI1Q5T686 147 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 CD276Q5ZPR3 534 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 ASPHD2Q6ICH7 369 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 GPR141Q7Z602 305 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 FAM58AQ8N1B3 248 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 Q8NFD4 153 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 OR6M1Q8NGM8 313 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 OR13F1Q8NGS4 319 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 PPP1R35Q8TAP8 253 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 TBC1D15Q8TC07 691 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 C1orf159Q96HA4 380 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 FAM192AQ9GZU8 254 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 CST11Q9H112 138 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 GSX1Q9H4S2 264 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 TXNL4BQ9NX01 149 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 MTCH1Q9NZJ7 389 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 V9GY05 133 aa14.67□□□□□ -0.06
CLSTN3-210ENST00000540931 C3orf80F5H4A9 247 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 H7C1Q1 480 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 AIREO43918 545 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 BPNT1O95861 308 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 ECDO95905 644 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 IGHV2-5P01817 119 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 CHRM2P08172 466 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 SMIM18P0DKX4 95 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 GATA3P23771 443 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 IL13RA1P78552 427 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 DMRTC1Q5HYR2 192 aa14.66□□□□□ -0.06
CLSTN3-210ENST00000540931 C1orf100Q5SVJ3 147 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms