RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 PLA1AQ53H76 456 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 ZNF782Q6ZMW2 699 aaPredicted RBP11.77□□□□□ -0.53
MSRB3-209ENST00000540804 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 C1QL4Q86Z23 238 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 DYNAPQ8N1N2 210 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 OR2T27Q8NH04 317 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 FAM110DQ8TAY7 271 aaPredicted RBP11.77□□□□□ -0.53
MSRB3-209ENST00000540804 PRRG3Q9BZD7 231 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 MOB1AQ9H8S9 216 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 HES4Q9HCC6 221 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 SF3B6Q9Y3B4 125 aaKnown RBP11.77□□□□□ -0.53
MSRB3-209ENST00000540804 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 VWFP04275 2813 aa11.77□□□□□ -0.53
MSRB3-209ENST00000540804 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
MSRB3-209ENST00000540804 SLC1A7O00341 560 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 TIMM23O14925 209 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 NOS1APO75052 506 aaPredicted RBP11.76□□□□□ -0.53
MSRB3-209ENST00000540804 TK1P04183 234 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 FASP25445 335 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 TGFBR2P37173 567 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 ERVK11-1P61568 191 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 COL10A1Q03692 680 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 Q6ZSR3 168 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 LHFPL4Q7Z7J7 247 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 CATSPERDQ86XM0 798 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 GID4Q8IVV7 300 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 RDH10Q8IZV5 341 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 ZNF561Q8N587 486 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 C11orf44Q8N8P7 122 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 OR10H4Q8NGA5 316 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 UBE2FQ969M7 185 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 SLAMF9Q96A28 289 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 MMP27Q9H306 513 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 IL36RNQ9UBH0 155 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 FOXJ3Q9UPW0 622 aa11.76□□□□□ -0.53
MSRB3-209ENST00000540804 SAC3D1A6NKF1 404 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 KRT8P05787 483 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 CALCBP10092 127 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 CCL1P22362 96 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 MPZP25189 248 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 HTR1FP30939 366 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 RAB13P51153 203 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 ACTR3P61158 418 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 ZNF85Q03923 595 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 TP53I3Q53FA7 332 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 C1orf146Q5VVC0 180 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 CRIP3Q6Q6R5 217 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 OR5R1Q8NH85 324 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 PIFOQ8TCI5 191 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-209ENST00000540804 EME1Q96AY2 570 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 MNTQ99583 582 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 MTCH1Q9NZJ7 389 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 OAZ3Q9UMX2 235 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 POLDIP2Q9Y2S7 368 aa11.75□□□□□ -0.53
MSRB3-209ENST00000540804 METTL15A6NJ78 407 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 SYT7O43581 403 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 CHST1O43916 411 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 JUNBP17275 347 aaPredicted RBP11.74□□□□□ -0.53
MSRB3-209ENST00000540804 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 DLX6P56179 175 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 IL24Q13007 206 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 OCLNQ16625 522 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 ASCC1Q8N9N2 400 aaKnown RBP11.74□□□□□ -0.53
MSRB3-209ENST00000540804 PLEKHA1Q9HB21 404 aa11.74□□□□□ -0.53
MSRB3-209ENST00000540804 WARS2Q9UGM6 360 aaKnown RBP11.74□□□□□ -0.53
MSRB3-209ENST00000540804 TMEM82A0PJX8 343 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 OR2T7P0C7T2 308 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 DUSP1P28562 367 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 GABRA5P31644 462 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 EDDM3BP56851 147 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 HABP2Q14520 560 aaPredicted RBP11.73□□□□□ -0.53
MSRB3-209ENST00000540804 TCF23Q7RTU1 214 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 RNF144BQ7Z419 303 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 ITFG2Q969R8 447 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 GABARAPL3Q9BY60 117 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 PKIBQ9C010 78 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 HEXA-AS1Q9H8Q6 139 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 USE1Q9NZ43 259 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 FBLN5Q9UBX5 448 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 AASSQ9UDR5 926 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 GNG8Q9UK08 70 aa11.73□□□□□ -0.53
MSRB3-209ENST00000540804 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 K7N7A8 449 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 ZNF737O75373 536 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 IGHA1P01876 353 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 ATP6V1E1P36543 226 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 NPBWR2P48146 333 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 EFNB2P52799 333 aa11.72□□□□□ -0.53
MSRB3-209ENST00000540804 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms