RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ZNF488Q96MN9 340 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 ALX4Q9H161 411 aaPredicted RBP14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 TMEM231Q9H6L2 316 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 FANCFQ9NPI8 374 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 BOD1L1Q8NFC6 3051 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 SPAARA0A1B0GVQ0 90 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 A0A1B0GW55 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 TPPPO94811 219 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L2P0CJ85 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L3P0CJ86 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L4P0CJ87 422 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L5P0CJ88 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L6P0CJ89 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4L7P0CJ90 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 FCGR2CP31995 323 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 SMCO1Q147U7 214 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 C1QTNF12Q5T7M4 302 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 CPEB3Q8NE35 698 aaKnown RBP14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 RDH5Q92781 318 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 SULT4A1Q9BR01 284 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 DUX4Q9UBX2 424 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 CPAMD8Q8IZJ3 1885 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 A0A0U1RQV5 110 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 IFNA21P01568 189 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 GP1BAP07359 652 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 PRKACBP22694 351 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 IKZF1Q13422 519 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 ANKRD55Q3KP44 614 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 HOGA1Q86XE5 327 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 ARRDC1Q8N5I2 433 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 ZSCAN4Q8NAM6 433 aaPredicted RBP14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 SECTM1Q8WVN6 248 aa14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 SF3B5Q9BWJ5 86 aaKnown RBP14.85□□□□□ -0.03
EPB41L3-204ENST00000540638 A0A0D9SG52 128 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 XRCC2O43543 280 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 NEURL1O76050 574 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 NHLRC3Q5JS37 347 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 ACOT7LQ6ZUV0 252 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 IGKV1-27A0A075B6S5 117 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 TRAV39A0A0B4J263 110 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 OR6C6A6NF89 314 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 SYNGR3O43761 229 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 ONECUT2O95948 504 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 PIGPP57054 158 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 SRSF6Q13247 344 aaKnown RBP14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 TSC22D1Q15714 1073 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 KCNMB1Q16558 191 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 HAGHLQ6PII5 290 aaPredicted RBP14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 CALHM1Q8IU99 346 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 OSR2Q8N2R0 312 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 DEFB124Q8NES8 71 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 PXT1Q8NFP0 134 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 OR5M9Q8NGP3 310 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 PRF1P14222 555 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 GLP1RP43220 463 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 LYPD6Q86Y78 171 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 OR10C1Q96KK4 312 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 HRH4Q9H3N8 390 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 TMEM9BQ9NQ34 198 aa14.84□□□□□ -0.03
EPB41L3-204ENST00000540638 A0A1W2PNU3 283 aaPredicted RBP14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 MELTFP08582 738 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 ASCL1P50553 236 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 SLC10A1Q14973 349 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 STK11Q15831 433 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 TUSC1Q2TAM9 212 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 FAM209AQ5JX71 171 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 RNASE11Q8TAA1 199 aaKnown RBP14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 OR5AC2Q9NZP5 309 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 CST2P09228 141 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 CBX5P45973 191 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 MPPED2Q15777 294 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 TREM1Q9NP99 234 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 PRSS50Q9UI38 385 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 GPR132Q9UNW8 380 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 KCNIP3Q9Y2W7 256 aa14.83□□□□□ -0.04
EPB41L3-204ENST00000540638 SERPINE3A8MV23 424 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 CRHP06850 196 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 ZNF728P0DKX0 622 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 RPA2P15927 270 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 ACTBL2Q562R1 376 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 LUZP4Q9P127 313 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 LIPGQ9Y5X9 500 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 MED19A0JLT2 244 aaPredicted RBP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 ZNF732B4DXR9 585 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 TNFSF12O43508 249 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 CD46P15529 392 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 NOVA1P51513 510 aaKnown RBP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 IDH3GP51553 393 aaPredicted RBP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 FAM3AP98173 230 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 PNLIPRP3Q17RR3 467 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 OR2T2Q6IF00 324 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 C17orf78Q8N4C9 275 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 EMG1Q92979 244 aaKnown RBP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 WNT2BQ93097 391 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 DMRTA2Q96SC8 542 aa14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 DSPP15924 2871 aaKnown RBP14.82□□□□□ -0.04
EPB41L3-204ENST00000540638 SFT2D2O95562 160 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms