RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PSMD9O00233 223 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 TTRP02766 147 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 ARG1P05089 322 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 CD28P10747 220 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 CEBPDP49716 269 aaPredicted RBP9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 ERVK11-1P61568 191 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF626Q68DY1 528 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 CCBE1Q6UXH8 406 aaPredicted RBP9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF782Q6ZMW2 699 aaPredicted RBP9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 Q6ZSR3 168 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 TMEM179BQ7Z7N9 219 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 DYNAPQ8N1N2 210 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 PKIBQ9C010 78 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 MMP28Q9H239 520 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 DNAJB9Q9UBS3 223 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 V9GYS6 101 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 CCDC182A6NF36 153 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 AQP12BA6NM10 295 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 PRR32B1ATL7 298 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 LOC110117498-PIK3R3F6TDL0 507 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 PEX14O75381 377 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 SRSF10O75494 262 aaKnown RBP9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 ALDOBP05062 364 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 MRPL3P09001 348 aaKnown RBP9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF728P0DKX0 622 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 CALB2P22676 271 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 ACTR3P61158 418 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 GNGT1P63211 74 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 IL24Q13007 206 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 HABP2Q14520 560 aaPredicted RBP9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 SNAPC1Q16533 368 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 AQP12AQ8IXF9 295 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 ELMOD2Q8IZ81 293 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 LYG1Q8N1E2 194 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 OR14K1Q8NGZ2 314 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 DNAJC9Q8WXX5 260 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 SGCDQ92629 289 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 CNN2Q99439 309 aaKnown RBP9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 MNTQ99583 582 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 AURKAIP1Q9NWT8 199 aaPredicted RBP9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 OR14J1Q9UGF5 321 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 IKZF2Q9UKS7 526 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 SLC22A13Q9Y226 551 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 R4GMQ9 66 aa9.68□□□□□ -0.86
CBX3P4-202ENST00000540428 H3BUI4 141 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF737O75373 536 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 CHRM2P08172 466 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 PIPP12273 146 aaPredicted RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 AZGP1P25311 298 aaKnown RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 RAB13P51153 203 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 OR12D2P58182 307 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 COL10A1Q03692 680 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 MEF2CQ06413 473 aaPredicted RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 MFGE8Q08431 387 aaPredicted RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 SSX2Q16385 188 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 BCL2L15Q5TBC7 163 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 MINOS1Q5TGZ0 78 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 TMEM236Q5W0B7 351 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 ASRGL1Q7L266 308 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 TMEM219Q86XT9 240 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 ASCC1Q8N9N2 400 aaKnown RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 PHF21AQ96BD5 680 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 CITED2Q99967 270 aaPredicted RBP9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 TVP23BQ9NYZ1 205 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
CBX3P4-202ENST00000540428 NOTCH3Q9UM47 2321 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 A0A1B0GTI1 187 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 CCL1P22362 96 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 PRKACGP22612 351 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 VDAC2P45880 294 aaPredicted RBP9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 CRISP1P54107 249 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 EDDM3BP56851 147 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 ESRRGP62508 458 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF322Q6U7Q0 402 aaPredicted RBP9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 GDPD3Q7L5L3 318 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 HS3ST5Q8IZT8 346 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 OR8H2Q8N162 312 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 SNX22Q96L94 193 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 PRRG3Q9BZD7 231 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 SEBOXQ9HB31 216 aaPredicted RBP9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 OR52A1Q9UKL2 312 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 SNX5Q9Y5X3 404 aa9.66□□□□□ -0.86
CBX3P4-202ENST00000540428 hADV38S2A0JD32 116 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 FAM90A22PA8MWA6 464 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 F2RL2O00254 374 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 DNAJC8O75937 253 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms