RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 A0A1W2PS29 197 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 WIPF3A6NGB9 483 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 DEDDO75618 318 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 P2RY1P47900 373 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 DUSP2Q05923 314 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 FHL1Q13642 323 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TDRG1Q3Y452 100 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 SPSB3Q6PJ21 355 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 WDR5BQ86VZ2 330 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 EXD3Q8N9H8 876 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 ZPLD1Q8TCW7 415 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 GPR119Q8TDV5 335 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TSEN15Q8WW01 171 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 SDSLQ96GA7 329 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TECTBQ96PL2 329 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 NMNAT3Q96T66 252 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 CNTD2Q9H8S5 307 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 GPR27Q9NS67 375 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 GPR132Q9UNW8 380 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 A0A1B0GU03 582 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 PRR19A6NJB7 356 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 C1orf105O95561 183 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 EML2O95834 649 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ABHD16AO95870 558 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OPN1MWP04001 364 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OPN1MW2P0DN77 364 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OPN1MW3P0DN78 364 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CCKBRP32239 447 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 SPOCK1Q08629 439 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 PCK2Q16822 640 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 GLYATL3Q5SZD4 288 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 STPG4Q8N801 248 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OR5T1Q8NG75 326 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OR56A1Q8NGH5 318 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 NKD1Q969G9 470 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF764Q96H86 408 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 NRTNQ99748 197 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 NUDT9Q9BW91 350 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 MS4A8Q9BY19 250 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 TBC1D29Q9UFV1 150 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 WDR87Q6ZQQ6 2873 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 A0A0A6YYH2 397 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 A6NJ64 397 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 AHSA1O95433 338 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 TNFP01375 233 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 HSPB1P04792 205 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CELA2BP08218 269 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 PSG6Q00889 435 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 C1orf61Q13536 156 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 IAH1Q2TAA2 248 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF260Q3ZCT1 412 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ASPHD2Q6ICH7 369 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 C17orf78Q8N4C9 275 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 RCBTB1Q8NDN9 531 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 OR5AR1Q8NGP9 310 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 GRHL3Q8TE85 626 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CDS1Q92903 461 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 PGAM5Q96HS1 289 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 ADAD1Q96M93 576 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CMKLR1Q99788 373 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 RXFP3Q9NSD7 469 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM74BQ9NUR3 256 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 MRPL22Q9NWU5 206 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 FLRT3Q9NZU0 649 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CGGBP1Q9UFW8 167 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 CLDN16Q9Y5I7 305 aa8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 MRPS18BQ9Y676 258 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-243ENST00000540387 SPAG17Q6Q759 2223 aa8.34□□□□□ -1.08
CTNNA1-243ENST00000540387 HEATR5BQ9P2D3 2071 aa8.34□□□□□ -1.08
CTNNA1-243ENST00000540387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM212A6NML5 194 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 OR5G3P0C626 314 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 CLDN6P56747 220 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 GNB2P62879 340 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 PLXDC2Q6UX71 529 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 CSNK1A1LQ8N752 337 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TNFRSF14Q92956 283 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC35A4Q96G79 324 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 BOD1Q96IK1 185 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 ABHD14AQ9BUJ0 271 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 APOBEC3BQ9UH17 382 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 IKZF2Q9UKS7 526 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 CACNA1CQ13936 2221 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 CDC14CA4D256 554 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 NDUFS8O00217 210 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TOMM40O96008 361 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 C8orf89P0DMQ9 161 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 RPL4P36578 427 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 MMDQ15546 238 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 LINC01590Q5TEZ4 76 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 WDR25Q64LD2 544 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 PMS2CLQ68D20 193 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 LCN10Q6JVE6 187 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 SFTPA2Q8IWL1 248 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms