RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SLC25A10Q9UBX3 287 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-212ENST00000540230 HHLA2Q9UM44 414 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 POLDIP2Q9Y2S7 368 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 NXPH2O95156 264 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 FUT6P51993 359 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 IL24Q13007 206 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 TMEM185AQ8NFB2 350 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 OR13C3Q8NGS6 347 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 NRG4Q8WWG1 115 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 SLAMF9Q96A28 289 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 BORCS8Q96FH0 119 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 SDSLQ96GA7 329 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 MRPL48Q96GC5 212 aaKnown RBP12.42□□□□□ -0.42
UBE3B-212ENST00000540230 MED30Q96HR3 178 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 PKIBQ9C010 78 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 DCLRE1BQ9H816 532 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 CNTD2Q9H8S5 307 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 RASL12Q9NYN1 266 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 CLEC2DQ9UHP7 191 aa12.42□□□□□ -0.42
UBE3B-212ENST00000540230 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 LALBAP00709 142 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 ZNF20P17024 532 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 NDUFB7P17568 137 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 ATF1P18846 271 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 AZGP1P25311 298 aaKnown RBP12.41□□□□□ -0.42
UBE3B-212ENST00000540230 DCKP27707 260 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 CNN3Q15417 329 aaKnown RBP12.41□□□□□ -0.42
UBE3B-212ENST00000540230 SMIM21Q3B7S5 101 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 METTL11BQ5VVY1 283 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 CRIP3Q6Q6R5 217 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 UTS2BQ765I0 119 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 SETD9Q8NE22 299 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 C8orf46Q8TAG6 207 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 RGP1Q92546 391 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-212ENST00000540230 SPACA5Q96QH8 159 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 IL36RNQ9UBH0 155 aa12.41□□□□□ -0.42
UBE3B-212ENST00000540230 SIRT4Q9Y6E7 314 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-212ENST00000540230 H0YAE9 185 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 XPNPEP2O43895 674 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 SERPINA3P01011 423 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 PRDX2P32119 198 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 GBX2P52951 348 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-212ENST00000540230 CAV3P56539 151 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 IL18R1Q13478 541 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-212ENST00000540230 Q8N7P7 452 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 OR13C9Q8NGT0 318 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 GGHQ92820 318 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 LHX4Q969G2 390 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 RFT1Q96AA3 541 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 SIRT7Q9NRC8 400 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 OR14J1Q9UGF5 321 aa12.4□□□□□ -0.42
UBE3B-212ENST00000540230 DIMT1Q9UNQ2 313 aaKnown RBP12.4□□□□□ -0.42
UBE3B-212ENST00000540230 DNAJC9-AS1A6NH13 148 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 GPR37O15354 613 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 SPRY1O43609 319 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-212ENST00000540230 NPBWR2P48146 333 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 POU3F4P49335 361 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 RBP2P50120 134 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 UBA52P62987 128 aaKnown RBP12.39□□□□□ -0.43
UBE3B-212ENST00000540230 SLC34A1Q06495 639 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 DOC2BQ14184 412 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 DEFB112Q30KQ8 113 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 ASPHD2Q6ICH7 369 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 EGFL6Q8IUX8 553 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 DNAAF1Q8NEP3 725 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 OR5AK2Q8NH90 309 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 RPS4Y2Q8TD47 263 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 CEP19Q96LK0 163 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 CAB39Q9Y376 341 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-212ENST00000540230 KPTNQ9Y664 436 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 HSPE1-MOB4S4R3N1 261 aa12.39□□□□□ -0.43
UBE3B-212ENST00000540230 TRBV2A0A0J9YWF9 115 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 CALCBP10092 127 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 CAPZA1P52907 286 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 ATP1B3P54709 279 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 MTCP1P56278 107 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 MRPL28Q13084 256 aaKnown RBP12.38□□□□□ -0.43
UBE3B-212ENST00000540230 KLRD1Q13241 179 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 CDK5R1Q15078 307 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 ZFAND2BQ8WV99 257 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 TFAP2CQ92754 450 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 TMEM80Q96HE8 168 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 OPALINQ96PE5 141 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 JMJD8Q96S16 334 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-212ENST00000540230 COMMD4Q9H0A8 199 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 C19orf12Q9NSK7 152 aa12.38□□□□□ -0.43
UBE3B-212ENST00000540230 RBFOX1Q9NWB1 397 aaKnown RBP12.38□□□□□ -0.43
UBE3B-212ENST00000540230 IGKV1-12A0A0C4DH73 117 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms