RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MUC15Q8N387 334 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 SMIM4Q8WVI0 70 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 GTF3AQ92664 365 aaKnown RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 SELENOIQ9C0D9 397 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 CHST6Q9GZX3 395 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 IFT22Q9H7X7 185 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.06□□□□□ -0.8
VTN-202ENST00000539746 PLEKHJ1Q9NW61 149 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 MRPS7Q9Y2R9 242 aaKnown RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 COL6A6A6NMZ7 2263 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 SHANK1Q9Y566 2161 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 NCOA6Q14686 2063 aaPredicted RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 hCG_1807616A0A1W2PRN6 198 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 WIPF3A6NGB9 483 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 C17orf100A8MU93 164 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MCRIP1C9JLW8 97 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 NDUFA2O43678 99 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 PTTG1O95997 202 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 FUT3P21217 361 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 CDK2P24941 298 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MPV17P39210 176 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 CLDN12P56749 244 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 RBM11P57052 281 aaKnown RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 TAS2R20P59543 309 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 DYRK1AQ13627 763 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 ASPHD2Q6ICH7 369 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MEX3BQ6ZN04 569 aaKnown RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 Q6ZTK2 550 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MOB1BQ7L9L4 216 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MFSD4AQ8N468 514 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 FAM89BQ8N5H3 189 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 POC1AQ8NBT0 407 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 OR4M1Q8NGD0 313 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 Q8TCH9 128 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 NEU4Q8WWR8 484 aaPredicted RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 AQP3Q92482 292 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 EMG1Q92979 244 aaKnown RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 ORAI1Q96D31 301 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 GFI1Q99684 422 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 SYT3Q9BQG1 590 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 SAP30LQ9HAJ7 183 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 MYOZ1Q9NP98 299 aaPredicted RBP10.05□□□□□ -0.8
VTN-202ENST00000539746 IFT46Q9NQC8 304 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 DLL4Q9NR61 685 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 CBLN4Q9NTU7 201 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 TREM2Q9NZC2 230 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 ST3GAL6Q9Y274 331 aa10.05□□□□□ -0.8
VTN-202ENST00000539746 LAMA5O15230 3695 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 A6NNC1 897 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 SHISA9B4DS77 424 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 J3QKU1 62 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 HS3ST1O14792 307 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 PDCD6O75340 191 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 FSTL3O95633 263 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 KNG1P01042 644 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 EIF4EP06730 217 aaKnown RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 GRPP07492 148 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 CD3GP09693 182 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 PGA5P0DJD9 388 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 COX6B1P14854 86 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 MUC1P15941 1255 aaPredicted RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 TAS2R46P59540 309 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 ARFRP1Q13795 201 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 MEF2DQ14814 521 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 ZMYND11Q15326 602 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 C11orf88Q6PI97 169 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 OR5D18Q8NGL1 313 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 TIMD4Q96H15 378 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 Q96M66 194 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 SOSTQ9BQB4 213 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 SOX7Q9BT81 388 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
VTN-202ENST00000539746 SRRQ9GZT4 340 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 DNTTIP1Q9H147 329 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 CRIM1Q9NZV1 1036 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 DNAJB11Q9UBS4 358 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 PPP1R3CQ9UQK1 317 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 V9GYH0 126 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
VTN-202ENST00000539746 PIGBOS1A0A0B4J2F0 54 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 NKX6-3A6NJ46 265 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 OR7C1O76099 320 aaPredicted RBP10.03□□□□□ -0.8
VTN-202ENST00000539746 MELTFP08582 738 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 IGFBP2P18065 325 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 GLRA1P23415 457 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 DTYMKP23919 212 aa10.03□□□□□ -0.8
VTN-202ENST00000539746 ECI1P42126 302 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms