RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FBXW5Q969U6 566 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 MEGF10Q96KG7 1140 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 DIRC2Q96SL1 478 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 NICN1Q9BSH3 213 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 TLNRD1Q9H1K6 362 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 RABL2AQ9UBK7 228 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-204ENST00000539721 RABL2BQ9UNT1 228 aa13.7□□□□□ -0.22
TRAF3-204ENST00000539721 CHD3Q12873 2000 aaKnown RBP13.69□□□□□ -0.22
TRAF3-204ENST00000539721 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 A6NJ64 397 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 A6NNC1 897 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 J3QKU1 62 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 SCGNO76038 276 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 TAS2R20P59543 309 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 PITPNAQ00169 270 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 MPPED2Q15777 294 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 MOGAT2Q3SYC2 334 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 RAB12Q6IQ22 244 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 CELF2-AS1Q8N7Q2 184 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 ZNF488Q96MN9 340 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 RBFOX1Q9NWB1 397 aaKnown RBP13.69□□□□□ -0.22
TRAF3-204ENST00000539721 IL19Q9UHD0 177 aa13.69□□□□□ -0.22
TRAF3-204ENST00000539721 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-204ENST00000539721 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 A0A0A6YYD4 124 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 CHRM2P08172 466 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 CPT2P23786 658 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 MST1LQ2TV78 715 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ELP2Q6IA86 826 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 C16orf87Q6PH81 154 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ZNF826PQ6ZT77 177 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SNX29P2Q8IUI4 249 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 C11orf53Q8IXP5 236 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 GDPD1Q8N9F7 314 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 OR56B1Q8NGI3 324 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 Q96M66 194 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SPOCK3Q9BQ16 436 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 TM2D1Q9BX74 207 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ROS1P08922 2347 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 hCG_1807616A0A1W2PRN6 198 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 F8VVB4 439 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 F8VWA3 439 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 RAB27BO00194 218 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 HS3ST1O14792 307 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 PTBP3O95758 552 aaKnown RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ADH4P08319 380 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 PGA5P0DJD9 388 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 GABRR1P24046 479 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 MNDAP41218 407 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 PTH2RP49190 550 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SWI5Q1ZZU3 235 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 PIGYQ3MUY2 71 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 Q8IYB0 196 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 CHST4Q8NCG5 386 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 Q8NFD4 153 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 OR10R2Q8NGX6 335 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 EMG1Q92979 244 aaKnown RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SDHCQ99643 169 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-204ENST00000539721 MS4A5Q9H3V2 200 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 ST3GAL6Q9Y274 331 aa13.68□□□□□ -0.22
TRAF3-204ENST00000539721 SOCS1O15524 211 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 TPD52L2O43399 206 aaKnown RBP13.67□□□□□ -0.22
TRAF3-204ENST00000539721 GOSR1O95249 250 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 CD55P08174 381 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 PRKACAP17612 351 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 SNU13P55769 128 aaKnown RBP13.67□□□□□ -0.22
TRAF3-204ENST00000539721 RBM11P57052 281 aaKnown RBP13.67□□□□□ -0.22
TRAF3-204ENST00000539721 FGF12P61328 243 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 WDR82Q6UXN9 313 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 OR8H2Q8N162 312 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
TRAF3-204ENST00000539721 FAM89BQ8N5H3 189 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 C15orf40Q8WUR7 153 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 ZFAND2BQ8WV99 257 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 CCDC32Q9BV29 185 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 FN3KRPQ9HA64 309 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 RHOFQ9HBH0 211 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 FAIMQ9NVQ4 179 aa13.67□□□□□ -0.22
TRAF3-204ENST00000539721 CLEC18AA5D8T8 446 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 AKR7A2O43488 359 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 TPPPO94811 219 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 GATA4P43694 442 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 GMFBP60983 142 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 CCL8P80075 99 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 TAF9Q16594 264 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 CLEC18BQ6UXF7 455 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 FAM58AQ8N1B3 248 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 Q8N402 240 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 POC1AQ8NBT0 407 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 CLEC18CQ8NCF0 446 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 NRIP2Q9BQI9 281 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms