RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 AQP3Q92482 292 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 NUDT16L1Q9BRJ7 211 aaKnown RBP13.1□□□□□ -0.31
VAMP1-207ENST00000539047 CCDC32Q9BV29 185 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-207ENST00000539047 BANF2Q9H503 90 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 CXorf56Q9H5V9 222 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 DECR2Q9NUI1 292 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
VAMP1-207ENST00000539047 V9GYH0 126 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 C17orf100A8MU93 164 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 HS3ST1O14792 307 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 XRCC3O43542 346 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 PLAUP00749 431 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 ADH4P08319 380 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 INHBBP09529 407 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 IRF2P14316 349 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 LOXP28300 417 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 EFNB2P52799 333 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 MRPS10P82664 201 aaKnown RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 QRFPP83859 136 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 DCTN2Q13561 401 aaKnown RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 HPS1Q92902 700 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 ERGIC1Q969X5 290 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 C1orf147Q96MC9 270 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 PALMDQ9NP74 551 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 GLS2Q9UI32 602 aa13.09□□□□□ -0.31
VAMP1-207ENST00000539047 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
VAMP1-207ENST00000539047 CADP27708 2225 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 CDIPTO14735 213 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 SYNGR1O43759 233 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 NXPH2O95156 264 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 CD55P08174 381 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 COX6B1P14854 86 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 BCL3P20749 454 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 VEGFCP49767 419 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 FGF12P61328 243 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 PRAMEF6Q5VXH4 476 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 TRIQKQ629K1 86 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 ELP2Q6IA86 826 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 C1QL2Q7Z5L3 287 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 CHST4Q8NCG5 386 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 TMEM104Q8NE00 496 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
VAMP1-207ENST00000539047 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 TLNRD1Q9H1K6 362 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
VAMP1-207ENST00000539047 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 A0A0G2JMP0 313 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 A0A0X1KG70 313 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 J3QRK9 145 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 AKR7A2O43488 359 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 PRKACAP17612 351 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 GABRR1P24046 479 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 GATA4P43694 442 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 PPOXP50336 477 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
VAMP1-207ENST00000539047 TAS2R20P59543 309 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 MAB21L1Q13394 359 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 SMIM21Q3B7S5 101 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 SNX29P2Q8IUI4 249 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 OR4M2Q8NGB6 313 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 OR10R2Q8NGX6 335 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 OR10Z1Q8NGY1 313 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 RAB3CQ96E17 227 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 Q96M66 194 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 UBTD1Q9HAC8 227 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 ST3GAL6Q9Y274 331 aa13.07□□□□□ -0.32
VAMP1-207ENST00000539047 SPTAN1Q13813 2472 aaKnown RBP13.07□□□□□ -0.32
VAMP1-207ENST00000539047 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 A0A1W2PP11 408 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms