RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ZNF626Q68DY1 528 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 LHFPL2Q6ZUX7 228 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 SLC7A5P1Q8MH63 180 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 OR10AD1Q8NGE0 317 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 OR2T35Q8NGX2 323 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 TMPRSS13Q9BYE2 586 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 DLL4Q9NR61 685 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 PKDREJQ9NTG1 2253 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 G3V3Q6 166 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 CREBL2O60519 120 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-205ENST00000538545 C1QBP02746 253 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 FAM87AP0C7U9 286 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 ANXA3P12429 323 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 SSTR2P30874 369 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 ST8SIA4Q92187 359 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
ACTN1-205ENST00000538545 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 CDK2AP1O14519 115 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 CCSO14618 274 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 RHBDL1O75783 438 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 OR7C1O76099 320 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-205ENST00000538545 OR4E1P0C645 316 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 H2BFSP57053 126 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 HAGHLQ6PII5 290 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-205ENST00000538545 WNT2BQ93097 391 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 MGAT4AQ9UM21 535 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
ACTN1-205ENST00000538545 WDR1O75083 606 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 GSTP1P09211 210 aaKnown RBP12.11□□□□□ -0.47
ACTN1-205ENST00000538545 AKR1C4P17516 323 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 AMY2BP19961 511 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 Q6ZPA2 131 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 FAM219AQ8IW50 185 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 WDR31Q8NA23 367 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 CSNK2A3Q8NEV1 391 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF436Q9C0F3 470 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-205ENST00000538545 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 SCP2D1Q9UJQ7 156 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 MEIKINA0A087WXM9 373 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 GOSR2O14653 212 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 IFNA6P05013 189 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 COX5BP10606 129 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 TSPAN5P62079 268 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 TGFBR3Q03167 851 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 WASF3Q9UPY6 502 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 COL12A1Q99715 3063 aa12.11□□□□□ -0.47
ACTN1-205ENST00000538545 H0YL77 283 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 SMPD2O60906 423 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 MPV17P39210 176 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 TBC1D28Q2M2D7 210 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 SLC25A40Q8TBP6 338 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 GHRLQ9UBU3 117 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF391Q9UJN7 358 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 DISC1C4P0D8 188 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 CDK10Q15131 360 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 NSUN5P2Q63ZY6 315 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 SEZ6L2Q6UXD5 910 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 OR1J1Q8NGS3 322 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 GPR137Q96N19 417 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 AHRRA9YTQ3 701 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 DHRS2Q13268 280 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 PPP1R1AQ13522 171 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 Q8NA96 180 aa12.1□□□□□ -0.47
ACTN1-205ENST00000538545 MARS2Q96GW9 593 aaKnown RBP12.1□□□□□ -0.47
ACTN1-205ENST00000538545 PRAF2O60831 178 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF35P13682 527 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 VAMP1P23763 118 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 PPP1CBP62140 327 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 LIME1Q9H400 295 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 GLRX2Q9NS18 164 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 PROCRQ9UNN8 238 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 SCGNO76038 276 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 CGAP01215 116 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 DNASE1P24855 282 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms