RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 RASL12Q9NYN1 266 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 MRPS28Q9Y2Q9 187 aaKnown RBP13.09□□□□□ -0.31
CNN1-202ENST00000535659 PPIAL4AQ9Y536 164 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 NPTNQ9Y639 398 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 ARID1AO14497 2285 aa13.09□□□□□ -0.31
CNN1-202ENST00000535659 SRRM5B3KS81 715 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 SLC17A2O00624 439 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 KDM4BO94953 1096 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 IL1AP01583 271 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 EGR1P18146 543 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 GLRA1P23415 457 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 HTR2CP28335 458 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 NPBWR2P48146 333 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.31
CNN1-202ENST00000535659 CLEC12BQ2HXU8 276 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 FAM201AQ5SY85 155 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 FAM166AQ6J272 317 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 GLIPR1L1Q6UWM5 242 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 OR6M1Q8NGM8 313 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 METTL9Q9H1A3 318 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 ELL3Q9HB65 397 aaPredicted RBP13.08□□□□□ -0.31
CNN1-202ENST00000535659 RHOFQ9HBH0 211 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 PLGRKTQ9HBL7 147 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 NDUFA13Q9P0J0 144 aa13.08□□□□□ -0.31
CNN1-202ENST00000535659 DPPA5A6NC42 116 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 IFITM5A6NNB3 132 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 NOTOA8MTQ0 251 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 F8VVB4 439 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 F8VWA3 439 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 WNT9BO14905 357 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 SLC22A1O15245 554 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 NOL3O60936 208 aaKnown RBP13.08□□□□□ -0.32
CNN1-202ENST00000535659 ZNF205O95201 554 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 FSTL3O95633 263 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 BCL3P20749 454 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 RANBP1P43487 201 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
CNN1-202ENST00000535659 SERPINB10P48595 397 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 CAV3P56539 151 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 GMFBP60983 142 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 RSU1Q15404 277 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 SHEQ5VZ18 495 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 SFRP4Q6FHJ7 346 aaPredicted RBP13.08□□□□□ -0.32
CNN1-202ENST00000535659 Q8IYB0 196 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 SLC25A28Q96A46 364 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 TMEM165Q9HC07 324 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 PCDHB16Q9NRJ7 776 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 GHRLQ9UBU3 117 aa13.08□□□□□ -0.32
CNN1-202ENST00000535659 A0A0G2JK05 382 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 SMIM30A4D0T7 59 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 CCDC160A6NGH7 325 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
CNN1-202ENST00000535659 LGALS8O00214 317 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 ZNF780AO75290 641 aaPredicted RBP13.07□□□□□ -0.32
CNN1-202ENST00000535659 NXPH2O95156 264 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 SFTPBP07988 381 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 MUC1P15941 1255 aaPredicted RBP13.07□□□□□ -0.32
CNN1-202ENST00000535659 ART1P52961 327 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 BTG1P62324 171 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 GPR176Q14439 515 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 Q5PR19 223 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 HES5Q5TA89 166 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 TEX36Q5VZQ5 186 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 AWAT2Q6E213 333 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 USP43Q70EL4 1123 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 LRRC28Q86X40 367 aaPredicted RBP13.07□□□□□ -0.32
CNN1-202ENST00000535659 BATF2Q8N1L9 274 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 TBC1D15Q8TC07 691 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 ISOC1Q96CN7 298 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 SEH1LQ96EE3 360 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 PIMREGQ9BSJ6 248 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 RBM38Q9H0Z9 239 aaKnown RBP13.07□□□□□ -0.32
CNN1-202ENST00000535659 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 IL36GQ9NZH8 169 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 STEAP1Q9UHE8 339 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
CNN1-202ENST00000535659 TANC2Q9HCD6 1990 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 SMIM31A0A1B0GVY4 71 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 OOEPA6NGQ2 149 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 AIPO00170 330 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 HTR3BO95264 441 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 UBBP0CG47 229 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 CFPP27918 469 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 CD80P33681 288 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 ZMYND11Q15326 602 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 RAB11BQ15907 218 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 MICBQ29980 383 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 ELP2Q6IA86 826 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
CNN1-202ENST00000535659 ACP7Q6ZNF0 438 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms