RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 WDR25Q64LD2 544 aaPredicted RBP11.66□□□□□ -0.54
VPS11-205ENST00000534551 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 OR52N4Q8NGI2 321 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 GAFA1Q96PS6 74 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 TMED9Q9BVK6 235 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 PKIBQ9C010 78 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
VPS11-205ENST00000534551 MTCH1Q9NZJ7 389 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 BLOC1S6Q9UL45 172 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
VPS11-205ENST00000534551 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
VPS11-205ENST00000534551 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
VPS11-205ENST00000534551 C2CD3Q4AC94 2353 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 NAV3Q8IVL0 2385 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 PIN1P1O15428 100 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 FOXH1O75593 365 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 NXPH2O95156 264 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 PSG2P11465 335 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.54
VPS11-205ENST00000534551 ADRA2CP18825 462 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 GABRA2P47869 451 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 NPBWR2P48146 333 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 RBP2P50120 134 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 GABARAPL2P60520 117 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ZP1P60852 638 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.54
VPS11-205ENST00000534551 IL24Q13007 206 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 TBCEQ15813 527 aaPredicted RBP11.65□□□□□ -0.54
VPS11-205ENST00000534551 DGUOKQ16854 277 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 YIF1BQ5BJH7 314 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ZNF529Q6P280 563 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 C1orf229Q6ZS94 237 aaPredicted RBP11.65□□□□□ -0.54
VPS11-205ENST00000534551 LHFPL2Q6ZUX7 228 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 NLRC3Q7RTR2 1065 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 SERPINA12Q8IW75 414 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ANGPTL6Q8NI99 470 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ZNF671Q8TAW3 534 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ST8SIA4Q92187 359 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 TMIGD2Q96BF3 282 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 TMPRSS13Q9BYE2 586 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 HES4Q9HCC6 221 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 CLN8Q9UBY8 286 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
VPS11-205ENST00000534551 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 RFPL4AA6NLU0 287 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 RFPL4AL1F8VTS6 287 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 GABRPO00591 440 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 DVL1O14640 695 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 RAB3AP20336 220 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 PRKACBP22694 351 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 ATP1B3P54709 279 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 BDH1Q02338 343 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 PAX2Q02962 417 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 ACSM1Q08AH1 577 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 Q499Y3 187 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 DCAF12L2Q5VW00 463 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 FAHD2BQ6P2I3 314 aaPredicted RBP11.64□□□□□ -0.55
VPS11-205ENST00000534551 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 DNAAF1Q8NEP3 725 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 UFD1Q92890 307 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 TMEM203Q969S6 136 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 DACT3Q96B18 629 aaPredicted RBP11.64□□□□□ -0.55
VPS11-205ENST00000534551 FAHD2AQ96GK7 314 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 DERL3Q96Q80 235 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 FAM192AQ9GZU8 254 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 NEK6Q9HC98 313 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 NOX4Q9NPH5 578 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 ACOT13Q9NPJ3 140 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 OR5V1Q9UGF6 321 aa11.64□□□□□ -0.55
VPS11-205ENST00000534551 IGHV2-70DA0A0C4DH43 119 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 ZNF879B4DU55 563 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 CRLF1O75462 422 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 CD2P06729 351 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 IGFBP3P17936 291 aaPredicted RBP11.63□□□□□ -0.55
VPS11-205ENST00000534551 DUSP1P28562 367 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 OR3A4PP47883 348 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 KISS1Q15726 138 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 KCNJ8Q15842 424 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 SMIM21Q3B7S5 101 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 DDI2Q5TDH0 399 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 ZNF788Q6ZQV5 615 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 SATL1Q86VE3 508 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 ZNRF1Q8ND25 227 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 EMG1Q92979 244 aaKnown RBP11.63□□□□□ -0.55
VPS11-205ENST00000534551 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
VPS11-205ENST00000534551 PPIL3Q9H2H8 161 aaKnown RBP11.63□□□□□ -0.55
VPS11-205ENST00000534551 OPN4Q9UHM6 478 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms