RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ALX3O95076 343 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 MT-ND2P03891 347 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 HKR1P10072 659 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ZNF19P17023 458 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 PRDX2P32119 198 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 GBX2P52951 348 aaPredicted RBP12.75□□□□□ -0.37
UBXN1-217ENST00000534176 OR12D2P58182 307 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 GMFBP60983 142 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 HOXA4Q00056 320 aaPredicted RBP12.75□□□□□ -0.37
UBXN1-217ENST00000534176 SRSF2Q01130 221 aaKnown RBP12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
UBXN1-217ENST00000534176 DGUOKQ16854 277 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ODF4Q2M2E3 257 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 CALHM1Q8IU99 346 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ZNF676Q8N7Q3 588 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 TMEM185AQ8NFB2 350 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 PELI1Q96FA3 418 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 C4orf36Q96KX1 117 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 CEP19Q96LK0 163 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 ESM1Q9NQ30 184 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 FRRS1LQ9P0K9 344 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 GLS2Q9UI32 602 aa12.75□□□□□ -0.37
UBXN1-217ENST00000534176 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 FAM230AA0A1W2PPH8 454 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 RFPL4AA6NLU0 287 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 RFPL4AL1F8VTS6 287 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 SFTPBP07988 381 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 CHRM2P08172 466 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 AMY2BP19961 511 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 KIR3DL2P43630 455 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 CAPZA1P52907 286 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 ERVK11-1P61568 191 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 ACSM1Q08AH1 577 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 VMO1Q7Z5L0 202 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
UBXN1-217ENST00000534176 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 SEH1LQ96EE3 360 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 ERVK13-1Q9NX77 482 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 PCDHGB5Q9Y5G0 923 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
UBXN1-217ENST00000534176 SYNGR1O43759 233 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 FBP1P09467 338 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 MYL12AP19105 171 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 UBE2E1P51965 193 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 BRD3OSQ6XYD6 125 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 Q6YL49 198 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 LDLRAD3Q86YD5 345 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 SERPINA12Q8IW75 414 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 C3orf56Q8N813 242 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 OR13C3Q8NGS6 347 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 OR5AK2Q8NH90 309 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 PPP1R35Q8TAP8 253 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 LHX4Q969G2 390 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 ZNF48Q96MX3 618 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-217ENST00000534176 FGF20Q9NP95 211 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-217ENST00000534176 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
UBXN1-217ENST00000534176 MAB21L2Q9Y586 359 aa12.73□□□□□ -0.37
UBXN1-217ENST00000534176 IGHV3OR16-10A0A075B7F0 116 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 BTBD17A6NE02 478 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 OR4C45A6NMZ5 311 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 POM121CA8CG34 1229 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 H0YAE9 185 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 FCN3O75636 299 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 CRYBA1P05813 215 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 CD2P06729 351 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 ATF1P18846 271 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 BMXP51813 675 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 MTCP1P56278 107 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 RPL31P62899 125 aaKnown RBP12.72□□□□□ -0.37
UBXN1-217ENST00000534176 RCN1Q15293 331 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 LHFPL3Q86UP9 236 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 OR52I1Q8NGK6 324 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 TRMT10AQ8TBZ6 339 aaKnown RBP12.72□□□□□ -0.37
UBXN1-217ENST00000534176 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 HEXA-AS1Q9H8Q6 139 aa12.72□□□□□ -0.37
UBXN1-217ENST00000534176 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
UBXN1-217ENST00000534176 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 A0A1B0GW55 424 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 A6NIN4 97 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 K7N7A8 449 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 MAGEB3O15480 346 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 RBP4P02753 201 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 TK1P04183 234 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 DUX4L2P0CJ85 424 aa12.71□□□□□ -0.37
UBXN1-217ENST00000534176 DUX4L3P0CJ86 424 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms