RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 AHSA2Q719I0 299 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 CALHM1Q8IU99 346 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 MKXQ8IYA7 352 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 DNAAF1Q8NEP3 725 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 OR5D14Q8NGL3 314 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 OR10AC1Q8NH08 325 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 C22orf15Q8WYQ4 148 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 GGHQ92820 318 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 SPSB1Q96BD6 273 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 CPNE2Q96FN4 548 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 GAFA1Q96PS6 74 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 NRIP2Q9BQI9 281 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 SCN3BQ9NY72 215 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 CNOT2Q9NZN8 540 aaKnown RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 IGHV3OR16-10A0A075B7F0 116 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 A0A1B0GW55 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 RFPL4AA6NLU0 287 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 RFPL4AL1F8VTS6 287 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 SIGLEC5O15389 551 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 MAGEB3O15480 346 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-227ENST00000533909 TOX4O94842 621 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 TFF1P04155 84 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 HCKP08631 526 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 PRDX2P32119 198 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 HSPA13P48723 471 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-227ENST00000533909 GPR157Q5UAW9 335 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4L9Q6RFH8 374 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-227ENST00000533909 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 SERPINA12Q8IW75 414 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 Q8IYB0 196 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 OR52N1Q8NH53 320 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 GPR148Q8TDV2 347 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 NRG4Q8WWG1 115 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 EMG1Q92979 244 aaKnown RBP11.09□□□□□ -0.63
CAPN1-227ENST00000533909 UPRTQ96BW1 309 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 ZNF649Q9BS31 505 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 ZCCHC4Q9H5U6 513 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 CNTD2Q9H8S5 307 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 PLCXD1Q9NUJ7 323 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
CAPN1-227ENST00000533909 SELLP14151 372 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 SOX2P48431 317 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 TAS2R43P59537 309 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 ARF6P62330 175 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
CAPN1-227ENST00000533909 CDK5R1Q15078 307 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 DGUOKQ16854 277 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 ZNF561Q8N587 486 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-227ENST00000533909 WDFY2Q96P53 400 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 GLS2Q9UI32 602 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 PSORS1C1Q9UIG5 152 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 ERGIC3Q9Y282 383 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 PCDHGB5Q9Y5G0 923 aa11.08□□□□□ -0.64
CAPN1-227ENST00000533909 IGKV1-27A0A075B6S5 117 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 IGKV1-9A0A0C4DH69 117 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 PTGES3LE9PB15 166 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 SULT1B1O43704 296 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 KNG1P01042 644 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 FSHBP01225 129 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 RAB3AP20336 220 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 CAV3P56539 151 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 PPP3R1P63098 170 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 BLMHQ13867 455 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 PDCD1Q15116 288 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 IZUMO2Q6UXV1 221 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 FAM185AQ8N0U4 392 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 ASCC1Q8N9N2 400 aaKnown RBP11.07□□□□□ -0.64
CAPN1-227ENST00000533909 ZNRF1Q8ND25 227 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 RFT1Q96AA3 541 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 SMIM19Q96E16 107 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 SDSLQ96GA7 329 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 GPER1Q99527 375 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 MDFIQ99750 246 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 CKLFQ9UBR5 152 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
CAPN1-227ENST00000533909 ZNF222Q9UK12 451 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms